Pseudochaenichthys georgianus (South Georgia icefish): 117468354
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Entry
117468354 CDS
T09629
Symbol
caprin2
Name
(RefSeq) caprin-2
KO
K18744
caprin-2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117468354 (caprin2)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117468354 (caprin2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
117468354
NCBI-ProteinID:
XP_033968308
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All DBs
Position
23:321752..348411
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AA seq
839 aa
AA seq
DB search
MVHLSPSPNLDVTPPEHLKDGEDRRRDLVVADGPKGGSPLGLSTQQLSMETSTVYYGYDL
YIEDGLICLKNKVRNLEKKKLKLEDYKRRLTWGEELNHDQMAAAEKYEEVLHHLAFAQEL
HKTLDELTQNLLRAQRKAVRKDKVAKVDTERRNLTSVLHFQHLLHIMQLEHIRTDLLAGR
NQAPLITAQQLQSLSQLATLLGVKRDHTLSLEEQMERAAVAHLDLLEGKDKPVAGSTYKL
FKEELAELMSCKYFTCLPSPPINPAKESLRAHSHSPIATSNPKEVSKENWKGGFQTRERV
PPDCWDQDSSVGPCPPPAAVHRPWRGAATFIPKGSVTTKKQSAGCKQRKRRAKGVRPANS
AGYMDMPLELFNSTYALPKDPFLRKQHLEDLVTKIHGSFSFMQDSLLEGEISPINVHQKL
KQRSSKSPSPLGHADLGSPVDVLPKEMHSTPLPPRLIERRASKTNGDQCLETSALKVPSL
DLPHEPRQLAERKGFPSPPLYRREATIPVSLEKSCAYTPESKKHPPCSRVESCTVNLPQG
RTFSTPPSRRTLTSSQFQNIQQVFKVNATFSQNGEFKYKPDSSVFAEPRYSIASTQTPAE
FFPPEDELQPGGSYIPQTHLRDCGPTFYAARDAGYHHGHRCGGGNLSAAWSDSSQVSTPD
REGAFTIVDSGQGDSLSVSTMEVPLSPHGDHQALLPMQLYPLSQPLRVAFNASRTANFAP
GNLDQPIAFDQLHSNLGEMFDTSMGRFTSPVNGTYVFLFHILKLAINVPLYINLMRNEEV
MVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRGAIYGSTWKYSTFSGFLLYQDST
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacctgtctccttcgcctaacctggatgtcacaccacctgagcacttgaaggac
ggggaggacagacggagggaccttgtggtggctgatggcccaaaggggggctcgcccctg
ggtctgagcacccagcagctcagcatggagacctccactgtctactacggctatgacctc
tacatcgaagatggtctcatctgcttaaaaaacaaagtccgcaacttggagaaaaagaag
ctgaaacttgaagactacaagaggaggctgacctggggggaggaacttaaccatgatcag
atggcggcggcggaaaagtacgaggaggtgcttcatcacctggcattcgcacaggagctg
cacaaaaccctggatgaattgactcagaatttgttgagagcccagaggaaggccgtgagg
aaggacaaagtggcaaaggtggacactgagaggaggaatctgacctctgtgctgcatttc
cagcaccttctccacatcatgcagttggagcacatcaggacagacctgctggctggacgc
aaccaggcccccctcatcacggcccagcagctgcagagcctgagtcagctggccaccctg
ctgggagtcaagagagatcacaccctgagtttggaggagcagatggagcgggcggctgtg
gcccacctggacctgctggaagggaaagacaagccggtggctggatccacatataagctg
ttcaaagaagaactcgctgagctgatgagctgcaagtacttcacttgtcttccatctcca
cccattaaccctgcaaaggagtctctgagagcccacagccacagccctatagccacatca
aacccaaaggaagtttccaaggagaactggaaggggggcttccagaccagggagcgggtg
cctcctgactgctgggatcaggactcatctgttggaccctgtcccccccctgctgcagtt
cacagaccatggagaggggctgccaccttcatccccaaaggctccgtcaccaccaagaaa
caatctgctggctgcaaacagagaaaacggagagccaaaggagtgcgacccgccaactcg
gcaggttacatggatatgcctttggagcttttcaactctacatatgccttacccaaagac
cctttcctcagaaaacagcacctagaggaccttgtgacaaagatccatggctccttcagt
tttatgcaggactctcttctagagggtgagatctctccaatcaatgtccaccaaaaactg
aagcagaggtcatctaagtctccatcccctttaggacatgctgacttaggaagtccagtt
gatgtcctgccaaaagaaatgcattccaccccactgcctcccaggcttattgagcgcaga
gccagtaagactaatggggatcagtgcttggagaccagtgcactaaaagttccttcactg
gacttgcctcatgagccgcgacagctagctgaaagaaaggggtttccttcacctccgctg
taccgcagggaggccaccattcctgtcagcctggagaagagctgcgcttatactccagag
tcaaagaagcatcccccctgcagcagggttgagtcgtgcactgtcaaccttcctcaggga
aggactttctccacacctccctccagacgaactctgacttcttcacagtttcagaatatc
cagcaggtcttcaaggtgaatgctaccttttctcagaatggagaatttaaatacaaacca
gattcttcagtttttgctgaacctaggtacagcattgccagtacccaaacaccagctgag
tttttccccccggaagacgaactacaaccaggaggatcctacattccccagactcatcta
agggactgtggccccaccttctatgctgcgagagacgctggataccatcatggccataga
tgtggaggaggtaacttgagtgcagcctggagtgactcttcccaggtcagcaccccagac
cgggagggagcatttacaattgtggactcgggtcagggggattctctgtcggtgtccacc
atggaggtccctctctctccccacggtgaccatcaagccctgcttccgatgcaactctac
ccactctcccagccattaagagtggcctttaatgcctcccgcactgccaattttgcccca
ggcaatctggaccagcccattgccttcgaccaactgcacagcaaccttggagagatgttt
gacaccagcatgggccgcttcacctcccctgtcaatggaacctatgtcttcctcttccac
atcctgaagcttgccatcaacgtgcctctctatattaacctcatgcgcaacgaagaggtg
atggtttctgcatacgccaacgatggggccccagatcacgagacagccagcaaccacgct
atcctgcccctctttcagggagaccaagtgtggctccgtttgcatcgcggggcaatctat
ggaagcacctggaagtacagcaccttctctggcttcctgctctaccaggattcaacctga
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