Pseudochaenichthys georgianus (South Georgia icefish): 117468372
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Entry
117468372 CDS
T09629
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117468372 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117468372 (nup107)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117468372 (nup107)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117468372 (nup107)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117468372 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF3990
DUF4485
Motif
Other DBs
NCBI-GeneID:
117468372
NCBI-ProteinID:
XP_033968336
LinkDB
All DBs
Position
23:24324257..24349136
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AA seq
907 aa
AA seq
DB search
MDWVQNELPSPVVREDEVTVAGRRRSMRKKVYFPSPDSSPIASSVTPARSMMRNTPASLF
RQAVTPRVPDVSTILAPAGRTPRYTPRHGRSSLNLDDSDWTNQTYFSPVSGLGDTSFFTE
DITNLSSALLKEDDPGDAAAASLFPEFLGSFLKHSSSAVFELLEDYQALCQDKVDVLQSV
VLRAGQNSKTAGVRWLLQQENCSWRLITSLYRDRVQLAMEDDMMTDMVVPSESEKVVVEQ
LFQRDAAIRQSQLVVDWLESIAKDQIGDFSDNIEYYAKNVCWENTLHTLKMRRKSSTGFT
VPLVTELDPDAPLRQQRPLVDLDREDDARLMKNLFTLIRAGMTEEAQRLCKRCGQAWRAA
SLEGWKLYHDPNMTSGSVALQPVEGNPQRGIWKACCWRMAEEEQLNRYEKAIYASLSGNL
KPLLAVCESWEDCVWAHFRVMVDSLVEKDLVSSGMAHQEVETLPREYLEANWTMEKVFEE
LQASELKRVLEETKEHYHVIQKFVILGDIDGLLEEFSDWLTDSKPLPSHLLRFMTHLLLF
YRSLGLALKEEVCVDVLKAYVSLLIRDQQTDLVANYVSQLPSELGTIQYAAFLETVTQPE
IRPRCLQLATDAGLDVAAITKLVVETVREREETEFTHHSQTLETGTNKEDLSKIDVIDWL
LFDPAHRAESLKQSNAIMRKFLAMQKHDAAKAVFSKVPEDSMREIYSQWSGVGQTTPLPA
EDENSIREHLCIRAYLEAHEAFTDWFSHSSSAPQKPAPAPEAKFTERVANEMREKEYQSS
LSAWSGRLDVLTEDVKERIYNVLLFVDGGWMIDNRQDSEEDSERSHQMAALRSLCLPRLS
FLLLSVLQNSSRHQEALRLADIISSDQHRLYQVFSKEELRRFLQKLRESSLALLDRGLDP
LGYELQP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggactgggttcagaatgagctgccgtctccggtggttcgagaagacgaggtgaccgtc
gctggccgtagaaggtcaatgaggaagaaggtgtacttcccgtcacccgacagcagcccc
atcgcctccagcgtcacaccagctcgctccatgatgaggaacaccccggcttcactgttc
agacaggctgttactcccagggttccagatgtttccaccattctggctccagcaggtcga
acgcctcgatacacacccagacacggtcgcagcagtttgaatttggacgacagcgattgg
acaaaccaaacgtacttctctcctgtttctggactgggggacacgagcttcttcacggag
gacatcaccaacctcagctcggctctgctgaaggaagacgaccccggagatgctgcggct
gccagtcttttcccagagttcctcgggtcctttctgaaacactcttcctctgcggtgttc
gagctgctggaggactaccaggcgctctgccaggacaaggtggacgttctgcagtctgtg
gtgctccgagccgggcagaacagcaagaccgccggagtccgctggctgctgcagcaggag
aactgctcctggaggctcatcacctcgctctacagggaccgggtccagttggcgatggaa
gatgacatgatgacagacatggttgttcccagcgagagtgagaaagtggtcgtggagcag
ctgttccagcgagatgccgccatacgacagagtcagctggtcgttgattggctggaaagc
atcgccaaggatcagatcggagatttctcagataatatcgaatactacgccaaaaacgtc
tgctgggagaacaccctccatacgctgaagatgaggaggaagagcagcaccggcttcacc
gtccctctggtcactgagctggacccggacgcccctctccggcagcagcgccccctggtg
gatctggacagagaggacgacgctcgcctgatgaagaacctcttcacgctgatcagagcc
gggatgaccgaggaggctcagaggctgtgtaagcgctgcggtcaggcctggagagcagcg
tctctggagggatggaaactctaccacgaccccaacatgacctcagggagtgtggcgctg
cagccggtggaaggaaaccctcagagaggaatctggaaggcctgctgctggaggatggct
gaggaggagcagctaaacagatacgagaaagcgatctacgccagcctgagcggaaacctc
aaaccgctgctggcggtgtgtgagtcgtgggaggactgtgtgtgggcgcatttcagagtg
atggtcgactctctggtggaaaaagatctggtgtcgtcggggatggcccaccaggaagtg
gagacactgccgcgggaatacctggaggccaactggacgatggagaaggtgttcgaggag
cttcaggcctcagagttgaagagggtgttggaagagacaaaggagcattaccacgtcatc
caaaagtttgtcatcctgggagacatcgacggtctcttggaggagttctctgattggctg
acagactctaagcccctcccctcccacctgctgcgcttcatgactcacctgctgctgttt
taccgctctctgggtttggctctgaaggaggaggtgtgtgtggacgttctgaaggcgtac
gtttccctcctgatccgggatcagcagaccgacctcgtggcgaattacgtgagccagctt
ccctctgaactcggcaccattcaatacgccgcctttttagagaccgtcacccagccggag
atccgcccacgctgcctgcagctcgccaccgatgctggtctggatgtcgccgcgataacg
aagctggtggtggagacggtgagagagagagaggaaacggagttcactcaccacagccag
acgctggagacaggaaccaataaggaggacctgagtaagatcgacgtcattgattggctg
ctgtttgaccccgcccatcgcgcagagtccctaaaacagtccaacgccatcatgaggaag
ttcctggcgatgcagaaacacgacgcggcgaaggcggttttctccaaagtccccgaggac
tcgatgagggagatttactctcagtggtcgggggtcggacagacgactcctctccccgcg
gaggacgagaactccatcagagaacacctgtgcatcagagcctacctggaagcccacgag
gccttcactgattggttcagccacagcagctccgccccacagaaaccagcacctgctcct
gaggccaaattcaccgagagagtagccaatgagatgagagagaaggagtaccagtcgtcc
ctgtctgcctggtctggtcgtctggacgttctgactgaagatgtgaaagagagaatctac
aacgtgctgctgttcgtcgacggcggctggatgatcgacaacagacaggattcggaggag
gattcagagcgcagccaccagatggcggcgttgcgctcgctgtgtttgcctcgcctcagt
ttcctgctgctcagcgtcctgcagaactcctccagacaccaggaggcgctgcggctcgct
gacatcatctcctccgaccagcaccgcctctaccaggtgttctctaaggaggagctgagg
aggttcctgcagaagttgagggagtcgtctctcgctctgttggaccgaggactcgacccg
ctgggctacgagctgcagccgtga
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