Pseudochaenichthys georgianus (South Georgia icefish): 117468376
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Entry
117468376 CDS
T09629
Symbol
hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117468376 (hcn4)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117468376 (hcn4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
GAS
Motif
Other DBs
NCBI-GeneID:
117468376
NCBI-ProteinID:
XP_033968342
LinkDB
All DBs
Position
3:47042581..47136404
Genome browser
AA seq
1430 aa
AA seq
DB search
MERLHSSMRKRLYSLPQHIGQKASIMGEGEDADKDTRRKSLRMKPLLSPSPTSGGSCKGI
GETKSGETVIMETDIGRPMKTSSNGDCRRFRGSLSSITSRHVHDSDSAEERRLITEGDVT
PSEESPPGAIGDGPPDQGAQGASGGGGGGGGGGGTQKDPPEQQSGFIKLDGIDQILPDDE
RLFQAGFMHRQLGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWD
LTMLLLMVGNLIIIPVGITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEI
ILDPQQIKIKYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLL
RLLRLSRLIRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFP
ADCWVSKNKMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCY
AMFVGHATALIQSIDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDE
ESILGELNEPLREEIINFNCRKLVACMPLFANADPNFVTSMLTKLKFEVFQPGDYIIREG
TIGRKMYFIQHGVVGVLTKGNKETKLSDGSYFGEICLLTLGRRTASVRADTYCRLYSLSV
DNFNEVLEEYPMMRRAFEMVAVDRLDRIGKKNSILQHKVQHDLNSGELNYQETEIIQQIV
QHDRDMAHCAHFFQNVPPQPPSPTPVIWAPLIQAPLQAAAATTSVAIALTHHPNLPQTFF
RPPVSLLGSLKDPPTRFKKFPTFVPPSTAPGSAGDSPCSTPSKLHSGSDMPLLASFRAMH
PMSGTGATGSSQQASGSGDQHASIVTGSGSSRGGASAFPFGPNLSSGSPSSSMAQLHPQP
QHQLPFRSNTPPLSNLFRQGSTGGSTGSGISGGAVGPCAGATGWSSGGAVGGSVEGATGG
DTAWAGEDFTTGPLPGAHFGLRRTTGRFVVEISGESFGGIPQGSVGAACGKSAGTIGDRR
RSLVRASGGSVGGSSGESLEVATTGGSLRRASGESMGAMSWSSTVRDTGGGLAVVSSDSI
GNPAGTLGRSSGGATSSHIGGVLSGPGLGMIGHIGQTAGGAFGSYIGGSTSCPIGGTSAG
ITAGLHGSSRCQSPISTGSSSPMSGQPLQSQPPPKPPQVAPLQQFAGGGRTTPGLNIFHS
PPHGSPSSSRGQYTQQPVEGPPSSHGHFSLAGLHSGLRPHQLSLERSALASLCQYGSANA
SPCLTPVAPSPTIQSPGAGRTFHYSDPSSATGSHSSLLMPQSSLPSQPLSQPHATGRDSP
MGRFSEDLKLLYSSHPSLPQEVAQALGHVTLPTSVEPGYYPSPFSSPSLVPKPCSSVPGR
MTPPIQMSPGQPHQTLSPGASPALPLRRASAAYSSDLEPQTVRSKLPSNL
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggctgcactcctccatgcgtaaaaggctctatagtttgccacagcacattgga
caaaaagcatctataatgggggaaggagaagacgcagacaaggacacccggaggaagagt
ctcaggatgaagcctctgctgtcaccgtcgccgacctctggaggaagctgcaaaggcatc
ggggagaccaaaagtggggagactgtgatcatggagacggacatagggagaccgatgaag
accagctcaaatggagattgtcggagatttcgaggcagcctctcttccatcacaagtcgc
catgtgcacgactctgactcggcggaggagaggcgcctcatcaccgagggggatgtcacc
ccgagcgaggagagcccgcccggagccatcggtgatgggccgccggatcaaggcgcgcaa
ggggccagcggtggcggtggcggcggcggtggcggtggtggtacgcaaaaagatccacca
gaacagcagtcagggtttataaagttggatggcattgatcaaattctgccggacgacgag
agattatttcaagcagggttcatgcacagacagttaggggcaatgcttcaaccaggggtc
aacaagttctccctgaggatgtttggaagtgagaaggcggtggaacgagaacaagagcgg
gttaaatccgccggattttggataattcacccatacagtgatttcaggttttactgggac
ttgaccatgctgctgctgatggtgggcaacctcatcatcatccctgtgggcatcacgttc
ttcaaagacgagcacacgccaccctggatcgtgttcaacgtggtttccgacaccttcttc
ctcatggacctggtcctcaacttccggacgggcatcgtcaaggaggacaacacagagatc
attctagatccacaacagatcaaaatcaagtacttgcggagttggtttgtggtggacttc
atctcctccattcctgtggactatatcttcctcatcgtggagacgcgcatcgattctgat
ttctacaagacggcgcgcgccttgcggattgtccgattcacaaagatcctcagcttgctg
cggctcctgcgactctccagactaattcgctacatccaccaatgggaagagatcttccac
atgacctatgacctcgccagcgccatggtgaggatcgtcaacctgatcggcatgatgctg
ctgctgtgtcactgggacggctgcctgcagttcctggtgcccatgctgcaggacttcccc
gccgactgctgggtgtccaaaaataagatggtgaatgacacatggggacagcagtactcc
tacgcacttttcaaagctatgagccacatgctgtgtattgggtatggcatgtaccccccg
gtgggcatgacagacgtgtggctgaccatcctcagcatgattgtgggagctacctgctac
gccatgtttgtgggacacgccaccgcgctgatccaatccatagactcatctcgacggcag
taccaggagaagtacaaacaagtggagcagtacatgtccttccacaagctgccagccgat
atgaggcagagaatccacgactactacgagcaccggtaccaggggaagatgttcgacgag
gagagcatcctgggagagctgaacgagccgctccgagaggaaatcatcaactttaactgt
cgaaagctggtggcgtgcatgcctctgtttgccaacgccgaccccaactttgtcacctcc
atgctaaccaagctgaagttcgaggtgttccagccgggggattatatcatcagggagggc
accatcggaagaaaaatgtacttcatacagcacggggtcgtcggcgtgctaaccaaaggc
aataaagagaccaagctgtcagatggctcctactttggagagatttgtttgctgacgctg
ggcagaaggacagccagtgtccgagcggacacctactgtcgcctgtactcgctgtctgtg
gacaacttcaacgaggtgctggaggagtatcccatgatgagaagggcctttgagatggtt
gccgtggacaggctggaccgtattggcaagaaaaactccatcctgcagcacaaggtgcaa
cacgacctcaattctggtgaactcaactaccaggagactgagatcatccagcagatagtg
cagcatgacagggacatggcccactgtgcccacttcttccagaatgtcccaccccagcct
ccttcaccaacccctgtcatctgggcccctctcatccaggcccctctccaggcagcagcc
gccaccacctcagtagccattgcccttactcaccatcccaacctcccacaaacttttttc
aggcctccggtttctcttctggggtccttaaaggatcctccaacccggtttaagaagttt
cccacttttgttcctccatccacagcacctgggtctgctggggactctccttgtagcaca
ccctctaaactgcactctgggtcggacatgccattgctggcctcttttcgggccatgcac
ccgatgtcaggtactggcgcaactggctctagccaacaggcctcaggtagcggagaccag
catgcatctattgttactggctctgggtccagtagaggaggggcctctgccttcccattt
ggaccaaacttgtcctctggttcaccttcatctagtatggcccagctacacccgcagcca
cagcatcaactgccgtttcgctccaacaccccaccactctcaaacctcttccgccaagga
tctacaggtggaagcacagggtcaggaataagtggaggagcagttggaccctgtgctgga
gcgacagggtggtcttcaggtggcgctgttggcggttctgtagaaggagcaacaggagga
gacactgcttgggccggagaggactttacaacagggccactcccaggggctcactttggg
ttgcggagaactactggcagatttgtagtagagatctcaggggaatcatttggagggata
cctcaaggatcagtgggtgctgcttgtggcaagtcagcagggacaataggagatagaagg
agatcactcgtaagagcttctgggggatcagtaggagggtcttctggggaatcactggaa
gtagcaaccactggaggttccctgcgaagagcttctggtgaatcaatgggagcaatgtct
tggtcatccacggtaagggatactgggggtggacttgcagtggtttcaagtgattcaatt
gggaatcctgcagggacattgggaaggtcttctggaggagccacaagtagccatatagga
ggggttttaagtggacccgggttagggatgataggacatattggccaaacagcaggaggg
gcatttgggagctatataggcgggtctacatcttgtcccattggagggacttctgctgga
ataactgctggacttcatggttcctctcgttgtcagagtcctatatctaccggctcgtcc
agcccaatgtctggtcagcccctccaaagccagccccctcccaagcctcctcaggtggcc
cctttgcagcagtttgcagggggaggtaggactacccctggcttaaatattttccattcc
cccccacatggctccccatcctcaagcagaggacagtacacccagcagcctgtcgagggc
cccccatcttcccatggccattttagcttggcaggcctccattctggcctacgtccgcac
cagttgtcccttgagaggtctgcactggcctccctttgccagtatggttcagccaacgcc
tccccctgccttacccctgtggcgcctagccctactattcaaagcccaggggctggcaga
actttccactacagcgacccctcaagtgccacaggatcccacagttctctactcatgcct
caatcttccctcccttcacagcctctaagccagcctcatgcaacggggagagattctccg
atgggacgtttttccgaggacctcaagcttttatacagttcgcacccgtctctgccccag
gaagtggcccaggccctaggccatgttactcttcccacctctgtggagcctggatattac
ccctcacccttttcctcaccaagtcttgtgcccaaaccctgtagctcagtgccagggcgc
atgactcctccaatccagatgtctccggggcaacctcaccaaactctgtcccctggggcg
tccccggccttgcctctacggagggcctctgctgcctactcatcagatctagaacctcaa
actgtccgctctaaactcccgtccaatttgtga
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