Pseudochaenichthys georgianus (South Georgia icefish): 117468411
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Entry
117468411 CDS
T09629
Symbol
ptprz1b
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase gamma
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117468411 (ptprz1b)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pgeo00535
]
117468411 (ptprz1b)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117468411 (ptprz1b)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117468411 (ptprz1b)
Proteoglycans [BR:
pgeo00535
]
Cell surface proteoglycans
Others
117468411 (ptprz1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
KRAB
Y_phosphatase3
Pur_ac_phosph_N
PTP-NADK
GUN4_N
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
117468411
NCBI-ProteinID:
XP_071057885
LinkDB
All DBs
Position
23:16069449..16105431
Genome browser
AA seq
1531 aa
AA seq
DB search
MDQNWIYEDSDVPLHKPRRGSRSNRPSSRKWRPFPSLDHYTPPVEDITDIFYEDTVNNSP
GGTNSSAAAVLPGMIANPHPEHRLLTPWSKFRCRPLKTAAPPLANLAHKPAPPCPPPPAT
MDHRTGGDPSNTLAESLYKSFTTSSLLRGLVHTTQPMLNGALNQRNWGKKYPSCRSARQS
PVDIDETFTQVRVQYQNLQLDGWDALTAGSSTVHNNGKTVSISVEGDFFVSGGGLSSRFR
VGTISFHWGRCNASSDGSEHSLNGMKYPLEMQIYCYDPAFLSLEDAVRKGGRMAALAVLF
EISLDDNEKFSPVIEAVTTVSRFGKSGSIEAFTLRSLLPNNTDKYYIYNGSLTAPPCSET
VEWILFKQPVAISETQLEVFCDVMTMEQAGYVILTDYLQNNFREQQQFMGQVFASYTGVE
DVLTPTCSSEPENVQADAQNDTTIVVMWERPRVVYDTTIDWYTVTYQRLQGREQSRQEYR
TDGDQDVGAFIPGLLANSSYVVQVVAVCTNGLRGRWSDQIIVDMPLEDPESDSDSDAVSK
GLEGNREVQSKAKSAPPETQNPAEDHSPVEEIPVEQTRVYQNLPVQVTPRPPPDNPSEST
LQRKTKIKPIVRKKPSRASPEPDAMDQNWIYEDSDVPLHKPRTNPSFDGNGAIWVGEVTE
QPGFLFPVARATTPPVRKQITEEASLSVTPHQVGDQGLTDQAAENGVPSPSLDHYTPPVE
DITDIFYEDTVNNSPGGTNSSAAAVLPAHTVVKVSLPPSEDSRTPVSEPRPQTSTSVSSA
PPPLWITGRVATPSNTLAESLYKSFTTSSLLRGLVHTTQPMLNEGSNSSHESRVGLVGGL
EREKRTVVPLAVVSTLTILCLLVLTGILVYWRNCFQVANFYPDDSVSPKVISVPSTPLLL
ATDGHEPLTVKQFVKHVMELHTTNTFSKEFEIVKESYEDVQACTVDMGITADSSNHPDNK
SKNRYINILAYDHSRVKLSSSLDRDASCGDYINANFVDGYERTRAYIAAQGPXRASREDF
WRMIWQQNVGVIVMITNLKEKGRTKCEQYWPEENQEEYGAYQVTLKSINALAYYTLRTFS
VRDTTNKAPQKRVEHTVLHYHYTQWPDMGVPEYTLPLLSFIRASSRARTQEMGPVLVHCS
AGVGRTGTYIVIDSMLQQIQEQGTVNVLGFLKHVRTQRNFLVQTEEQYVFIHDALVEAVM
SRGTLVTSDLLHTYVSDLLTPGASGRTRMDKQFKLISQRQAKHADYSTALRDGNAERNRA
RALMPVERSRVCLSTSESNSTGYINASYVVGHHHSKEFMVSQTPLDSTVADFWRLIWETH
THCCRSARHTLPGITLITTDCSEGAVSCDWPSKDQPMSFEGLIVSFSGEEHVCLSNDERL
LVQDFTLESQQDHHVLEVRQYSAPCWPNPDSPISNGFDVIRTVREHSRLSDSPTLVHDPL
GGATSGLFCALTSLCSQLEEDGAVDVYQVARMTNLMRPGVFNDIEQYQYLYRAVLSLVSS
QEDQRALQSPETNGSVPXGQNTIAESLESLM
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaactggatctacgaggacagcgatgttccattacacaagccgcgtagggga
tcaaggtctaacagaccaagcagcagaaaatggcgtcccttcccctcgttggaccactac
acccctcctgtggaggacatcaccgatatcttctatgaagacacagtcaacaactcccca
ggaggaaccaacagctctgctgctgctgtgttgccaggtatgatcgccaatcctcatcca
gaacatcgcttgctcacaccgtggtcaaagtttcgctgccgccctctgaagacagccgca
cccccgttagcgaacctcgcccacaaaccagcacctccgtgtcctccgccccccgccact
atggatcacaggacgggtggcgaccccagcaacacgctggctgagtccctctacaagtcc
ttcaccacctcctccctcctcagggggctcgtgcacacaacccagcccatgttgaatggt
gccctgaatcagcgcaactggggtaagaagtacccgtcttgtagaagcgccaggcagtct
cctgtggacatcgacgagacctttacccaggtccgtgtgcagtaccagaatctgcagctg
gacgggtgggacgcgctgacggcggggtccagcaccgtccacaacaacgggaagactgtg
tccatcagtgtggaaggggacttctttgtgagcggaggcgggctgagctccaggttccga
gtcggtacaatcagcttccactgggggcgctgcaatgcatcctcagatgggtctgaacac
agcctgaacgggatgaaatatcctctggagatgcagatctactgctacgatccagccttc
ctcagtctggaggatgctgtgaggaaaggaggcaggatggctgcgctggccgtgctcttt
gaaatcagcttggatgacaacgagaagttcagtcctgttatcgaggccgtcaccactgtc
agcaggtttggtaagagcggctcgattgaagccttcaccctgcgctccttgctgcctaat
aacacggataaatattacatctacaacggttcactaacggcaccgccatgctcggaaaca
gtggaatggatcctcttcaaacagcctgtggccatatcagaaacacagctggaggtgttt
tgtgacgtgatgaccatggagcaggctggatatgtgatcctgacagattacctgcagaac
aacttccgggagcagcagcagttcatgggtcaggtgttcgcctcgtacaccggcgtggag
gacgtgctcacacccacctgcagctcggagccggagaacgttcaggccgatgcccagaac
gacacaaccatcgtagtgatgtgggagcgtccccgcgtggtctacgacaccaccatcgac
tggtacaccgtcacctaccagaggctccagggccgcgagcagagcaggcaggagtacagg
acggacggggatcaggacgtgggtgccttcatccccggcctgctggccaacagcagctac
gtcgttcaggtggtcgctgtctgcaccaatggactcagagggcggtggagtgaccagatt
atagtggacatgccattagaagaccccgaaagtgattctgattctgacgctgtctccaaa
ggtctggaaggcaacagagaggttcaatctaaagccaaatcagcgccgccagagacccag
aatccggcggaggaccacagcccggtggaggagatcccggtggagcagacccgagtgtac
cagaacctcccggtgcaggtcaccccccgcccacccccagacaatccctctgagtccacc
ctgcaacgaaaaactaaaatcaaaccgattgtgagaaagaagccgagccgggccagccct
gaacccgatgctatggatcagaactggatctacgaggacagcgatgttccattacacaag
ccgcgtactaatccaagttttgatggcaatggggcaatatgggtaggcgaggtaactgaa
cagccgggcttcctgtttccagttgcccgggcaaccacaccgccagttcggaaacaaatc
acagaagaggcctcgttgtcggtgacgccacatcaggtaggggatcaaggtctaacagac
caagcagcagaaaatggcgtcccttccccctcgttggaccactacacccctcctgtggag
gacatcaccgatatcttctatgaagacacagtcaacaactccccaggaggaaccaacagc
tctgctgctgctgtgttgccagctcacaccgtggtcaaagtttcgctgccgccctctgaa
gacagccgcacccccgttagcgaacctcgcccacaaaccagcacctccgtgtcctccgcc
cccccgccactatggatcacaggacgggtggcgacccccagcaacacgctggctgagtcc
ctctacaagtccttcaccacctcctccctcctcagggggctcgtgcacacaacccagccc
atgttgaatgagggcagcaacagcagccatgagtctcgggtggggctggtcggaggtttg
gagagggagaagaggacagtcgttcctctggccgtcgtctccactctcaccatcctctgt
ctgctggtactgacgggcatactcgtctactggagaaactgtttccaggtggctaacttc
tacccagatgacagtgtgtcacctaaagtaatatcagttccatctacacccctgctgctg
gccacagacggtcacgagccactgacagtgaagcagtttgtgaaacacgtcatggagctg
cacaccaccaacactttctccaaggagtttgagattgtcaaagaatcctatgaggatgtg
caggcgtgcactgtggacatgggcatcactgccgacagctccaatcaccccgacaacaag
agcaagaacagatacatcaacatcctggcctatgaccacagtagagtcaagctctccagc
agtttagacagagacgccagctgtggagactacatcaacgctaactttgtggatggttac
gagcggacgagggcctacatcgcagcccagggccccntcagagcgagcagggaagacttc
tggaggatgatctggcagcagaacgtcggcgttatcgtcatgatcaccaacctcaaggag
aaaggacggacaaaatgtgagcagtactggccggaggagaaccaggaggaatacggggcg
taccaggtgaccctgaagagcatcaacgccctggcttactacactctgcggacgttctct
gtcagagacaccacaaataaggctcctcagaagagagttgaacacacagtcctacattac
cactacacccagtggccagacatgggcgtcccagaatacactctgcctctgctgtccttc
atcagagcgtcctccagggcgcggacgcaggagatgggacccgtcctcgtacactgcagt
gcgggtgtagggcggacaggaacctacatagtgattgacagcatgctgcagcagatccag
gagcagggcactgtgaacgttctcggtttcctgaaacacgttcggacgcagaggaacttc
ctggttcagacggaggagcagtacgtgttcatccatgacgctctggtggaggccgtcatg
agccgtggcaccttggtgacctctgacctccttcacacttacgtgtctgacctcctgacc
cctggggcatcgggcaggacgcgcatggacaaacagttcaagttgatcagccagcgccag
gcgaagcatgcagactacagcaccgccctgagggacggcaacgctgagaggaacagagcc
cgggccctgatgcctgtggagcgatcgagagtgtgtctgagcacttcagagtcaaactcc
accggctacatcaacgcctcctacgtcgtgggacatcaccacagtaaggagttcatggtg
agccagactcctctggacagcacggtggcagacttctggagactgatctgggaaacacac
acacactgttgtcggtctgccagacacacactgccaggtataacactcattaccacagac
tgtagtgaaggggcggtttcttgtgactggcccagtaaagaccagccaatgagctttgag
gggttaattgtgtcattttcgggggaggagcatgtgtgcctgtccaatgacgagagactt
ctggtgcaggactttacgctggaatcccaacaggaccaccatgtgttggaggtgcgtcag
tacagcgccccctgctggccaaaccctgacagtccaatcagcaacggttttgatgtgatc
cgtacagtcagagagcacagcagactgtcggacagccccacactcgtacacgacccgttg
ggcggagcgacatcagggctgttctgtgccctcacctctctgtgcagtcagctggaggaa
gacggagcagtggatgtttaccaggtggcacggatgaccaacctcatgaggcctggggtg
tttaatgatatagagcagtaccagtatctgtaccgtgccgtgctgagcctggtgagcagc
caggaggaccagagagcgctgcagagtccagagaccaacggctccgtgccgnngggtcag
aacaccatcgctgagagcctggagtccctcatgtag
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