Pseudochaenichthys georgianus (South Georgia icefish): 117468441
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Entry
117468441 CDS
T09629
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117468441 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117468441 (mybpc1)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117468441 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Ig_CYK3_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
117468441
NCBI-ProteinID:
XP_033968428
LinkDB
All DBs
Position
23:complement(10595298..10630311)
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AA seq
1408 aa
AA seq
DB search
MPEPTKKDEMANGQPEESVAPESNGAMPLPEITLEVSPPTEAVADGKEPVETDGKKPEPS
KPEPLQAVEAQEPSPTETNTNQPQPGGVGVKEQAESEHSTVKEEGPCSPPPTDDDAAVAT
TPSPTPHAESVAPESNGAMPLPEITLEVSPPTEAVADGKEPVETDGKKPEPSEPEPLQAV
EAQEPSPTETNTNQPQPGGVGVKEQAESEHSTVKEEGPCSLPPTESVAPVSNGAMPLPEI
TLEVSPPTDDDAAAATTPSLKPHAEDASSLKKLSIELPNDSVPVPAMGRKDSVWSLGDGQ
GADDLEKPIDSPPRSTLLIESPQSATILVGGDITFVAKVEAKDIFRKPTIKWIKGKWMDL
ASKTGKHLQLKETFERLTKIHTFEMHIIKAKDNYAGNYRCEVTYKDKFDSCCFDLEVKEA
EGSQNIDIRSAFKRSSEGQEDAGELDFSGLLKHREPKPDEGPDVDVWEILKNARPDQYEK
IAFMYGITDLRGLLKRMKKITRVEKKTEAFAKKLDPAYQADKGGKIRMVVDLADPTVELK
WYKNGQEIRPCPKYIFEHKGTQRIMVINNCSLNDDAAYSVAAGDENCATELFVKELPVKI
VKKIEPVKTTVNERIELECEVSEEGAQVKWMKNGVEVPTGVRSRYRVKCEGTKHFLVIDD
ASREDTGTYSLMATGGTSEAHIQVDLKPLKIFQDLQDMKVMLGQPINLQCEIFPGNVAGR
WYRNGQLIQPNDRINIVHKNKVHRLEVATSTLHDTGDYTFVPEGYSQSLSAKIHIIDPPR
VHLESLNFPDNTITIVAGNKLRLEIPITGEPAPRVVWMKGERVILESGHRVRAETYGDQT
SLTIDVTEREDTGNYKIILQNEAGEATASVKVKVVDIPDPPESPLVPVVGGDWCSMTWEP
PKYDGSSPILGYYIERKKKQSSRWMRLNFDLIKETSFEPKKMIEGVPYEVRIFAVNAIGS
SRPSEPSKAFTPLAVTSEPTMLVVDDITDTTVTVKWRPPETIGAAGLDGYLVEYCIEGTD
DWVVSNKELTEKTKFTITGLTPGTRILVRVKAINAAGASTPRTLQHHVMVKEIIEPPKIR
VPRHLKQTYTRRVGEAVNLVVPFMGKPRPKVNWLKEGQPIEPTHVNIRNTDCDSIIFIRK
AERSHSGKYEMTVQVENHVDTAILDIQVVDLPGPPHSVTIEDVWGGNVALVWTPPKDNGN
APITGYTIQKADKKTMEWFTCIEHYHRSCITITELVVGNEYFFRIFAENMCGLSETATQS
KQSALIVKEGMQVKTHEFTDHDFMEAPKFTQPLINTFAIAGYNATLNCSVRANPRAKVVW
MKNKITILDDPRYRMFSNQGVCTLEIRKPSPYDGGLYTCKAVNDLGEAQVDCKLEIKGGF
TFFELMQRGVPLHLIDKYMNEKVVEPQK
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcccacaaagaaagatgagatggcgaatggccagccagaagaaagtgttgcc
ccagaaagtaacggtgccatgcccctacctgagattaccctggaggtttctccaccaaca
gaggctgtagcagatgggaaagagccagtagagactgatgggaagaaaccagagccctca
aagcctgagccattacaggctgtggaggctcaggagccaagccccaccgagactaacaca
aaccaaccacagcctggtggggttggggtcaaagagcaggcagagtctgaacactctact
gttaaggaagagggtccttgctcccccccaccaactgatgatgatgctgcggttgccact
accccatccccaacaccccatgcagaaagtgttgcaccagagagtaacggtgccatgccc
ctacctgagattaccctggaggtttctccaccgacagaggctgtagcagatgggaaagag
ccagtagagactgatgggaagaaaccagagccctcagagcctgagccattacaggctgtg
gaggctcaggagccaagccccaccgagactaacacaaaccaaccacagcctggtggggtt
ggggtcaaagagcaggcagagtctgaacactctactgttaaggaagagggtccttgctcc
ctcccaccaactgaaagtgttgccccagtgagtaatggtgccatgcccctacctgagatt
accctggaggtttctccaccaacagatgatgatgctgctgcagccactaccccatcccta
aaaccccatgcagaggatgccagttcactcaagaaactctcaattgagttgcctaatgat
agcgtccctgtgccagccatggggagaaaagactcagtgtggtctctgggagacggccag
ggcgcagatgacctggaaaagcctattgacagcccaccacggtccaccctactgatagag
agtccacaaagcgccactatccttgtgggtggagacatcacctttgttgcgaaggtagag
gccaaagatattttccgcaaacccactatcaaatggatcaaaggaaaatggatggatctt
gctagcaagacaggaaagcacttacagctgaaagagacctttgaacgactgactaagatt
cacacatttgagatgcacatcatcaaggccaaagacaactatgcaggaaactacaggtgt
gaagtcacctacaaggacaagtttgacagctgttgctttgacttggaagttaaagaagct
gagggctcacagaatattgatatccgatcagctttcaaaagaagcagtgaaggacaagaa
gatgcaggggaacttgactttagtggtctccttaaacatagggagcccaaaccggatgaa
ggtccagatgttgatgtgtgggagatcctgaagaacgcccggccagatcagtatgagaag
attgccttcatgtatggtatcacagatctgaggggtctgctgaaaaggatgaagaagatc
acaagagtggagaagaaaactgaagcttttgccaagaaactggatccagcatatcaggca
gataaaggtggaaaaatccgcatggtggttgatctggctgaccccacagttgagctgaag
tggtacaagaacggacaggaaatcagaccctgtccaaagtatatctttgagcataagggc
acacaaaggattatggtcatcaacaactgctccttgaatgatgacgcagcttattctgta
gcagctggagatgagaattgcgccacagagctgtttgtcaaagagttgccagttaagata
gttaaaaagattgagccggtgaagaccacagtgaacgagaggattgagctggagtgcgag
gtgtcagaggaaggcgctcaggtcaaatggatgaagaatggtgttgaggttccaaccgga
gtgcgctccagataccgagttaagtgtgagggaacaaaacatttcttggtgattgatgac
gcctcccgggaggacactgggacatactccctcatggctacgggtggcacatctgaggcc
cacatacaggttgacttgaaaccgctgaagatatttcaggacttgcaagacatgaaggtg
atgctggggcaacccatcaatctgcagtgtgagattttcccaggcaacgtcgcaggtcgt
tggtacaggaatggacagctgatccagccaaatgaccgcatcaacatcgtacacaaaaat
aaggtccatcgtcttgaagttgcgaccagcactcttcatgacacaggggattacactttt
gtgcctgagggatattcacagagcctctctgccaaaattcacatcattgacccaccgagg
gtgcacttggagagtttgaactttccagacaacacaattacaattgtggcaggaaacaaa
cttcgcctggagatccccattactggagaaccagcgcccagggtggtgtggatgaaggga
gaaagggtgattcttgagtctggccatcgtgtccgagctgaaacgtatggcgaccagacc
agccttacaattgatgtaacagagcgggaggacacaggcaactacaagataatcctgcag
aatgaggctggtgaagcaacagccagcgtcaaggtcaaggttgtagacatccctgaccct
ccggagtctcccttggtcccagttgttggcggtgattggtgctccatgacatgggaacca
ccaaaatatgatggaagttctccaatattaggctactacatcgagagaaagaagaaacag
agctccagatggatgagactgaactttgatctgattaaagaaacatccttcgaacccaag
aagatgattgaaggagtgccatatgaagtgcggatctttgcagtcaatgctataggctcg
tccaggcccagtgaaccatccaaagcctttacccctctcgctgtgaccagtgagccaaca
atgctggttgtggacgatatcaccgacaccacagttacagtaaagtggcgtcctcctgaa
accatcggagctgccggtctggacggatacttagtggagtactgcatagaaggaactgat
gattgggtagtatccaacaaagagttgaccgagaagaccaagtttaccatcactgggctg
actccagggactagaatcttagttcgagtcaaagccatcaatgctgccggagccagcact
ccacggacccttcagcatcatgtcatggtcaaagagattattgaaccacccaagatccgc
gttccccgacacttgaagcagacatacactcgtagagttggagaggcggtgaacctcgtg
gtgccatttatgggcaaacccaggccaaaagtcaactggctgaaagagggccagcccata
gagcctacccacgtcaacatccgcaacacagactgtgacagcatcatctttatccgtaaa
gcagagcgcagccactccggaaagtatgagatgactgttcaagttgaaaaccatgtggac
acggccattcttgacatacaagttgtagatctacctgggcctcctcacagtgtcacgatt
gaagatgtttggggaggaaatgtagctctggtctggactcctccaaaggacaacggcaac
gccccaataacaggctacaccattcaaaaagcagacaagaaaacaatggaatggttcaca
tgcattgagcactaccatcgctcatgcatcaccatcacagagctggtggtagggaatgag
tacttcttcaggatctttgctgagaacatgtgtggcctaagcgaaactgccacgcaaagc
aaacaaagtgccctcatcgtcaaagaaggcatgcaggtgaaaacgcacgagttcacggac
cacgactttatggaggcaccaaagttcacacagccgctgatcaacacttttgctattgcc
ggctacaacgctactctaaactgtagtgtccgtgccaacccaagggctaaagtggtctgg
atgaagaataagataaccatcctggacgacccacggtaccgcatgtttagcaaccaggga
gtatgtactctggaaatcaggaagcccagtccctacgatggaggcctgtacacttgcaag
gccgtcaacgatctgggagaggcccaagtggactgcaagctggagatcaaaggaggcttc
accttcttcgagctcatgcaacgcggggtgcccctacacctgattgacaagtacatgaac
gagaaggttgtggagccacagaagtaa
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