Pseudomonas germanica: J0G10_00135
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Entry
J0G10_00135 CDS
T08191
Symbol
crc
Name
(GenBank) catabolite repression control protein Crc
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0G10_00135 (crc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgf03400
]
J0G10_00135 (crc)
Enzymes [BR:
pgf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J0G10_00135 (crc)
DNA repair and recombination proteins [BR:
pgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J0G10_00135 (crc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
QYY81898
UniProt:
A0ABX8YQV2
LinkDB
All DBs
Position
27524..28303
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGMNGDEDLN
QKFKLMDDFGKYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtcgagcgtggtttgctc
agttggctgcaagcacagaatgccgacgtcatctgcctgcaggacacccgtgcctccgcc
tttgaactggatgacccagccttccaactggatggctacttcctttatgcctgcgatgct
gaagtccctgcccaaggcggcgtggctttgtattcgcggttgcaaccgaaggctgtcatc
agcggtctcggtttcgagacggccgaccgctacgggcgctacctgcaagcagatttcgac
aaagtcagtattgccaccttgctgcttccttcggggatgaacggcgatgaggacttgaac
cagaagttcaagctcatggacgacttcggcaagtacctggacaaacagcggcgcaaacgt
cgcgagtacatttattgtggctcgctgtacgtggcgcagcagaagctcgacatcaagaac
tggcgcgacagccagcaatccccgggcttcctggcgccagaacgcgcctggatggacgag
attgtcggcaacatgggctatgtcgatgccctgcgcgaagtcagccgcgaaggcgaccag
tacagctggtggccggacaacgaacaggccgagatgctcaatctcggctggcggtttgac
taccagatcctgaccccgggcctgcggcgcttcgtgcgcagtgctcgcctgccgcgtcaa
ccacggttctcgcagcacgcaccgctgatcgtcgactacgactggacgctgaccatctaa
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