KEGG   Pseudomonas germanica: J0G10_00355
Entry
J0G10_00355       CDS       T08191                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pgf  Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:pgf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pgf03000]
    J0G10_00355
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pgf02044]
    J0G10_00355
Transcription factors [BR:pgf03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    J0G10_00355
Secretion system [BR:pgf02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   J0G10_00355
SSDB
Motif
Pfam: Sigma54_activat AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 HTH_30 GAF_2 GAF HTH_50 AAA_2 AAA_16 AAA_7 GAF_3
Other DBs
NCBI-ProteinID: QYY81940
UniProt: A0ABX8YQ73
LinkDB
Position
complement(75610..77130)
AA seq 506 aa
MFTQVPQPLVYAEALLAQFASLSRAADGAALLGDFVRGLAELSGCELTQLYLLDATHTCL
GMNAEYLDGALQPREAASLPADYNGEQLLQFALCQNRVVCLDDLSGSLHETSFLPAATSP
WQSLLCVPLVNQHKAVEGLLLCASRRRTNLQGFADSLGQLGSFVLGQLHLLQRLRQPLAE
SATVARSVPSISGYGLIGKSAAMRQTHSLISKVLHSPYTVLLRGETGTGKEVVARAIHDC
GPRRSQAFIVQNCAAVPENLLESELFGYRKGAFTGADRDRAGLFDAANGGTLLLDEIGDM
PLSLQAKILRVLQEGEIRPLGSNDTHKIDVRIIAATHRDLSTLVSEGKFREDLYYRLAQF
PIELPALRQREGDILELAQHFAEKTCTYLQRDPVRWSSAALEHLSGYNFPGNVRELKALV
ERAVLLCEGGELLAEHFSLRMEAMPEDNSHLNLRERLEQVERTLLLDCLRKNDGNQTLAA
RELGLPRRTLLYRLGRLNINLGDFDG
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgttcactcaggtgccgcagccactggtctatgccgaagcgttgctggcgcagttcgcc
agtctgtcgcgggcggcggacggtgctgcgttgctgggtgacttcgtgcgtgggttggcc
gagttgagcggttgcgaattgacgcagctgtatctgctcgacgccacccacacgtgcctg
gggatgaatgccgaatacctcgacggcgccttgcaaccgcgtgaagcggcgagcctgccg
gcggattacaacggtgagcaactgctgcaattcgccctgtgccagaaccgcgtggtgtgc
ctcgacgacttgagcggcagcctgcacgaaaccagtttcctgccagcggcgacctcgccg
tggcagtcgctgttgtgcgtgccactggtcaatcagcacaaagctgttgaaggtttgctg
ttgtgcgccagccgtcgtcgtaccaacctgcaaggcttcgccgattccctcggccagctc
ggctcgttcgtgcttggccaattgcatttgttgcaacgcctgcgtcaaccgctggcggaa
tcggcaacagtggcgcgcagcgtgccgagcatcagtggttatggtttgatcggcaaaagc
gcggcgatgcgtcagacccattcgctgatcagcaaagtcctgcacagcccgtacaccgtg
ttgttgcgcggcgaaaccggcaccggcaaggaagtcgttgcgcgggcgattcacgattgc
ggcccgcgccgttcccaggcgtttatcgtgcagaactgcgcggcggttccggaaaatctg
ctggaaagcgagctgttcggctatcgcaaaggcgcgttcaccggtgccgatcgcgaccgc
gccggcctgttcgatgcggccaatggcggcacgttgttgctcgacgagatcggcgacatg
ccgttgtcgttgcaggcgaagatcttgcgcgtgttgcaggaaggcgagatccgtccgctg
ggctccaacgacacgcacaaaatcgatgtacgcatcatcgccgcaacgcaccgcgatctg
tcgacgctggtcagcgaaggcaaattccgcgaggacttgtactaccgcctcgcgcaattc
ccgatcgagctgccggcgctgcgtcagcgtgaaggcgacatcctcgaactggcccagcac
ttcgccgagaagacctgcacgtatttgcaacgcgatccggtgcgctggtcgagtgcggcg
ctggaacacctgtccggctacaacttccccggcaacgtgcgtgaactcaaggcattggtc
gaacgtgcggtgctgttgtgcgaaggcggcgagttgctcgccgagcatttctccctgcgc
atggaggcaatgccggaagacaacagccacttgaatttgcgtgaacgcctcgagcaggtc
gaacgcacgttattgctcgattgcctgcgcaaaaacgacggcaaccagaccctcgccgcc
cgtgaactgggcttgccgcgacgcacgctgctgtatcggctcggccgtttgaacatcaat
ctgggagatttcgatgggtag

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