Pseudomonas germanica: J0G10_00360
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Entry
J0G10_00360 CDS
T08191
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pgf
Pseudomonas germanica
Pathway
pgf02025
Biofilm formation - Pseudomonas aeruginosa
pgf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
J0G10_00360 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
J0G10_00360 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgf02044
]
J0G10_00360 (tssH)
Secretion system [BR:
pgf02044
]
Type VI secretion system
Imp/Vas secretion system core components
J0G10_00360 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
NACHT
Clp_N
AAA_7
TniB
nSTAND3
Sigma54_activat
NBD_SMAX1
AAA_30
AAA_24
AAA_25
Hpr_kinase_C
SLFN-g3_helicase
CorA
Motif
Other DBs
NCBI-ProteinID:
QYY81941
LinkDB
All DBs
Position
complement(77141..79798)
Genome browser
AA seq
885 aa
AA seq
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MINVDLQQLIQALDAETRRDLERSAERCVARGGSKILVEDLMLGLLERPNGLLSRALQDA
DVDAGELSAALQSRVEHSASRNPVFAPELVQWLQDALLVANLELGQTQVEDAALILALLR
NPMRYAGSRYQPLLAKLNIDRLKEFALSQQEQPAANGKPAAQGESLLQRFTHNLTQQARD
GKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKG
VELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSD
AANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLA
QVYEKSHGIYLRDDAVVSAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLER
LRGELAEGGRQRQALRRDAEAGLLIDHEALDALEARLDEAETEMVALETLWTEQKQLAER
LLELRQQLAKAREAAAVEPVVTVEEDAEGTVIETVSAEVEEGQSVEALEAQLNETHSALT
AAQVKERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVH
ALDRSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQ
EKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGV
ANDGEGREIDFRNTLILMTSNLGSDKISDLCENGARPTAEVLEETIRPVLSKHFKPALLA
RMKVVPYYPVGGPVLRELIEIKLGRLGERLNRRQLDFSWCQNLVDHLSERCTQSESGARL
IDHLLDQHVLPLVADRLLDAMATGESLKRVHATLDGESSVTCEFA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaactcatccaggcgctggacgccgaaacccgtcgtgat
ctggaacgttctgccgagcgttgcgtggcccgtggcggcagcaagatcctcgtcgaagac
ttgatgctcggcctgctcgagcgtccgaacggtttgctgtcgcgcgcactgcaggatgcc
gacgtcgacgccggtgaactcagcgccgcgctgcaatcgcgggtcgaacacagcgcctct
cgtaacccggtgttcgccccggaactggtgcagtggctgcaagacgcgctgctggtagcc
aacctcgaactgggccagacccaggtcgaagacgcggcgctgatcctcgcgctgctgcgc
aatccgatgcgctacgccggcagccgttatcagccgctgctcgccaagctgaacatcgat
cgcctgaaggaatttgccctgtcgcaacaggagcaaccggcggccaacggcaaaccagcg
gcgcagggcgaatcgctgctgcagcgcttcacccacaacctgacccaacaggcccgcgac
ggcaaactcgacccggtgctgtgccgtgacggcgcgattcggcagatggtcgacatcctc
gcccgtcgccgcaagaacaacccgatcgtcgtcggtgaggccggtgtcggcaagaccgcc
atcgtcgaaggtctggcgtcgcgaatcgccgccggtgaagtgccgcaagtgctcaaaggc
gtagaactgctgtcgctggacatgggcctgctgcaggctggcgccagcgtcaaaggtgag
ttcgaacgtcgtcttaaaggcgtgatcgacgaagtcaaagcctcgccaaaaccgatcatt
ctgttcatcgacgaagcccacaccctgatcggcgcgggcggcaacgctggcggttccgat
gcggccaacctgctgaaaccggcactggcccgtggcgaactgcgcaccatcgctgcgacc
acctgggccgagtacaagaaatacttcgagaaagacccggcgctggcccgtcgtttccaa
ccggtgcaactgcacgaaccgaccgtcagtgaagcggtgaccatccttcgtggtctggcc
caggtttacgagaagagccacggcatttacctgcgcgatgacgcggtggtttcggcggct
gaattgtccgcacgttatctggccggtcggcagctgccggacaaagctgtcgatgtgctc
gacaccgcttgcgcccgcgtacgcatcagcctcgccgccgccccggaaagccttgagcgc
ctgcgtggcgaactggctgaaggtggccgccagcgtcaggccctgcgccgcgatgccgaa
gccggtctgctgatcgaccacgaagcgctggatgcattggaagcgcgtctcgacgaagcc
gaaactgaaatggtcgcgctggaaaccctgtggactgaacagaagcaactggccgagcgc
ctgctggaactgcgtcagcaactggccaaggcccgcgaagctgctgcggtcgagccagtg
gtcaccgttgaagaagacgccgaaggcaccgtgatcgaaaccgtctccgctgaggttgaa
gaaggccaaagcgtcgaagcgctggaagcccagctcaacgaaacccacagcgccctgacc
gccgcccaagtcaaagagcgtctggtcagcttcgaagtctgcccgcgtctggtcgccgaa
gtgatcagcgcctggaccggcgtgccattggcgcaactggcccgtgagcacaacgccaaa
gtcgccagtttcgccactgacctgcgcacgcgcatccgtggtcaggaacaggccgtgcac
gcactggatcgctcgatgcgcgccaccgctgccggtctgaacaagcctgacgcgccggtc
ggtgtgttcctgctggtcggcccgagcggcgtcggtaaaaccgaaaccgcgctggccctg
gctgacttgctgtacggcggtgatcgtttcatcaccaccatcaacatgtccgagttccag
gagaagcacaccgtctcccgtctgatcggcgcaccaccaggctacgtcggttacggcgag
ggcggcatgctcaccgaagccgtacgccagaaaccgtactcggtggtgttgctcgatgaa
gtcgaaaaggctgacccggacgtgctcaacctgttctaccaaatcttcgacaaaggcgtg
gccaacgacggcgagggtcgcgagatcgacttccgcaatacgttgatcctgatgacctcg
aacctcggtagcgacaagatcagcgacctctgcgaaaacggcgcacgcccgaccgctgaa
gtcctcgaagaaaccattcgcccggtactcagcaaacactttaaaccggcgctgctggcg
cggatgaaagtggtgccgtactacccggtcggcggcccggtattgcgcgagctgatcgag
atcaaactcggtcgtctcggcgagcgcctcaaccgtcgtcagctggatttcagctggtgc
cagaacctcgtcgatcacctgtccgagcgttgcacgcaaagcgaaagcggtgcgcgcctg
atcgaccatttgctcgaccagcacgttttgccgctggttgcggatcgtctgctcgacgcc
atggccaccggtgaaagcctcaagcgtgtgcatgccacgctcgacggcgagtccagcgtg
acgtgcgagttcgcctga
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