Pseudomonas germanica: J0G10_00400
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Entry
J0G10_00400 CDS
T08191
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pgf
Pseudomonas germanica
Pathway
pgf02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
J0G10_00400 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgf02044
]
J0G10_00400 (tssC)
Secretion system [BR:
pgf02044
]
Type VI secretion system
Imp/Vas secretion system core components
J0G10_00400 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QYY81948
UniProt:
A0ABX8YQ69
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All DBs
Position
complement(84632..86107)
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AA seq
491 aa
AA seq
DB search
MSTSAAQEKSAASGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVASV
SCMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacaagagaagagcgccgccagcggcgaatacagcattctcgac
agcatcatcgccgaaacccgtctgactccggacgacgaagcctacgacatcgccaagcgc
ggtgtgtcggccttcatcgaagaactgctcaagccgcagaacaacggtgagccggtcaag
aaggccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gagatcctgcaccacccggacttccaggctctggagtcgtcgtggcgtggcctgcagttg
ctggtcgaccgcaccaacttccgcgaaaacatcaaaatcgaaatcctcaacgtctcgaaa
gaagacctgctggacgatttcgaagactcgccggaagtcatgcagtcgggcctgtacaag
cacatctacactgctgaatacggccagttcggtggtcagcctgtgggcgcgatcatcgct
aactactacatgtcgccaagctcgccagacgtcaagctgatgcagtacgtggccagcgtt
tcgtgcatgtcgcacgcgccgttcatcgctgccgccggcccgaaattcttcggtctggaa
agcttcaccggcctgccggatctgaaagatctgaaagaccacttcgaaggcccgcaattc
gccaaatggcagagcttccgtacttcggaagactctcgttatgttggcctgaccgtgccg
cgtttcctgctgcgtaacccgtacgatccggaagaaaacccggtcaaatcgttcgtgtac
aaggaaaccgttgccaacagccacgagcactacctgtggggcaacacggcttacgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggcccg
cagagcggtggcgcggttgaagacctgccgttgcaccatttcgaaagcatgggcgaaatc
gaaaccaagatccctactgaggttctggtttccgaccgtcgtgaatacgaactggccgag
gaaggcttcatctccctgaccatgcgtaaaggctccgacaacgcggcgttcttctccgca
agctcagtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggccgcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ttgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcgtaccgacctcgagctg
gaactgaacaagtggatccgtcagtacgttgccgaccaggaaaacccgagcgccgaagtg
cgtggccgtcgtccactgcgcgctgcgcaagtgatcgtcagcgacgttgaaggcgagccg
ggctggtaccgcgtgagcttgaacgtgcgtccgcacttcaagtacatgggtgctgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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