Pseudomonas germanica: J0G10_00985
Help
Entry
J0G10_00985 CDS
T08191
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgf03032
]
J0G10_00985 (gyrB)
03400 DNA repair and recombination proteins [BR:
pgf03400
]
J0G10_00985 (gyrB)
Enzymes [BR:
pgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J0G10_00985 (gyrB)
DNA replication proteins [BR:
pgf03032
]
Prokaryotic type
DNA Topoisomerases
J0G10_00985 (gyrB)
DNA repair and recombination proteins [BR:
pgf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J0G10_00985 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QYY82060
LinkDB
All DBs
Position
220171..222588
Genome browser
AA seq
805 aa
AA seq
DB search
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISIIIHPDESITVKDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELVLTVRRSGKIWEQTYVHGVPQAPMAIVGDSETTGTQIHFKASSETFKN
IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQV
FHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
RDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDDAMEEYMTQSALEDASLHLNEEAPGISGEALERLVNDFRMVMKTLKRLSR
LYPQELTEHFIYLPAVSLEMLGDHAKMQDWLAQYEVRLRTVEKSGLVYKASLREDRERGV
WLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLSTLLDDGAYIQRGERKKAVTEF
KEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagaaaatacgtacgactcaacgagcattaaagtgctgaaaggcctggatgcc
gtacgcaaacgtcccggtatgtacattggtgacaccgacgatggcagcggtctgcaccac
atggtgttcgaggtggtcgacaactcgatcgacgaagccctcgccggccactgcgatgac
atcagcatcattatccacccggatgagtccatcaccgttaaagacaacggccgtggcatc
ccggtagacgtgcacaaagaggaaggtgtttccgccgccgaggtcatcatgaccgtcctc
cacgctggcggtaagttcgacgacaactcctacaaagtatccggcggtctgcacggtgta
ggtgtgtcggtagtgaacgcactgtccgaggagctggtactgactgttcgccgcagcggc
aagatctgggaacagacctacgtccacggcgtacctcaggctccgatggccatcgttggc
gacagcgaaaccaccggtacccagatccacttcaaggcttccagcgaaaccttcaagaac
attcacttcagctgggacatcctggccaagcgcattcgtgaactgtccttcctcaactcc
ggtgtcggcatcgtcctcaaggatgagcgcagcggcaaggaagagctgttcaagtacgaa
ggcggcctgcgtgcgttcgttgaatacctgaacaccaacaagactgcggtcaaccaggtg
ttccacttcaacatccagcgtgaagacggtatcggcgtggaaatcgccctgcagtggaac
gacagcttcaatgagaacctgttgtgcttcaccaacaacattccgcagcgcgacggcggt
acccacctggtgggcttccgttccgctctgacgcgtaacctgaacaactacatcgagcag
gaaggtctggcgaagaagcacaaagtcgccaccaccggcgacgatgcccgtgaaggcctg
accgcgatcatctcggtaaaagtgccggatccgaagttcagctcgcagaccaaagacaaa
ctggtgtcttccgaagtgaagactgcggtcgagcaggagatgggcaagtacttctccgac
ttcctcctggaaaacccgaacgaagccaagctggtcgtcggcaagatgatcgacgccgcc
cgtgcccgcgaagcggcgcgcaaggcccgtgagatgacccgccgcaaaggcgcgctggac
atcgccggcttgccgggcaagctcgctgattgccaggaaaaagacccggcgctgtccgaa
ctgtatctcgtggaaggtgactccgcgggcggctctgccaagcagggacgtaaccgcaag
acccaggcgatcctgccgttgaagggcaagatcctcaacgtcgagaaagcgcgtttcgac
aagatgatctcttcccaggaagtgggcaccttgatcaccgcactgggctgcggcatcggt
cgcgacgaatacaacatcgacaagctgcgttatcacaacatcatcatcatgaccgatgct
gacgtcgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagttgccg
gagctgatcgagcgcggctacatctacatcgcccagccgccgctgtacaaggtcaagaaa
ggcaagcaagagcaatacatcaaagacgacgacgccatggaagagtacatgacgcagtcg
gctctggaagatgcgagcctgcacctgaacgaagaagccccgggcatttccggtgaagca
ctcgagcgtctggtaaacgacttccgcatggtgatgaagaccctcaagcgtctgtcgcgc
ctgtacccgcaggaactgaccgagcacttcatttacctgccggccgtgagcctggaaatg
cttggcgaccacgccaagatgcaggactggctggcccagtacgaagtccgtctgcgcacc
gtcgagaagtccggtctggtctataaggccagcctgcgtgaagaccgtgaacgtggtgtg
tggctgccggaggtcgaactgatctcccacggcctgtcgaactacgtcaccttcaaccgc
gactttttcggcagcaacgactacaaaaccgtcgtcacccttggcgctcaactgagcacc
ctgctcgacgacggcgcgtacatccagcgtggcgagcgcaagaaggcagtcaccgagttc
aaggaagccctggactggctgatggcggaaagcaccaagcgccacaccattcagcgatac
aaaggtctgggcgaaatgaacccggatcagctgtgggaaaccaccatggacccaagcgtg
cgccgcatgctgaaagtcaccatcgaagacgccattggtgcagaccagatcttcaacacc
ctgatgggtgatgcggtcgaacctcgccgtgacttcatcgagagcaatgcgctggcggtt
tcgaacctggatttctga
DBGET
integrated database retrieval system
