Pseudomonas germanica: J0G10_01200
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Entry
J0G10_01200 CDS
T08191
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pgf
Pseudomonas germanica
Pathway
pgf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J0G10_01200 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pgf02022
]
J0G10_01200 (algB)
Two-component system [BR:
pgf02022
]
NtrC family
KinB-AlgB (alginate production)
J0G10_01200 (algB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
VpsR
cREC_REC
AAA_22
AAA_2
AAA_19
HTH_23
AAA_16
Xre-like-HTH
MCM
HTH_29
nSTAND3
DUF815
HTH_50
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QYY82102
LinkDB
All DBs
Position
266057..267403
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AA seq
448 aa
AA seq
DB search
MESATEHQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQADTLLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEIRKPKDGLDSHSPAMKVVLETARQVAGTDANILILGESGTG
KGELARAIHGWSKREKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRF
REDLLYRLNVITLHLPPLRERAEDILTLADRFLARFVKEYARPARGFSDEAREALLGYRW
PGNIRELRNVVERASIICPQERVEISHLGMAEQPANNAPRVGAALSLDELEKAHIGAVLA
TAGTLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgccactgagcatcaaggccgcattctgctggtggacgacgaatccgccatc
ctgcgtactttccgttattgcctcgaagatgaaggctatacggttgccacagccaacagc
gcggctcaggccgacaccttgctgcaacgccaggtcttcgatctgtgcttccttgattta
cgtctgggagaagacaacggcctcgacgtactggcgcagatgcgcattcaggcaccatgg
atgcgagtggtgattgtcaccgcgcattcggctgtcgataccgccgtcgacgcgatccag
gccggcgccgccgactatctggtcaaaccgtgcagcccggatcagttgcgtctggccact
gccaagcaattggaagtgcgccaactgtcggcgcgcctcgaggccctcgaaggcgagatc
cgcaaaccgaaggacggtctcgattcccacagcccggcgatgaaagtcgtactggaaact
gcacgtcaggtcgccggcaccgacgccaacattctgatcctcggcgagtccggcactggt
aaaggtgagctagcccgagcgattcacggctggagcaagcgcgagaaaaaatcctgcgtg
accatcaactgcccgtcgctgacggcggaattgatggaaagcgagctgttcggtcacagt
cgtggcgcctttaccggggccagcgaaagcacgttgggtcgagtcaatcaggctgacggc
ggcactctgtttctcgacgagatcggcgattttccactgacattacaacccaagttgcta
cgtttcattcaggacaaggaatacgagcgggtaggggatccggtcacccgccgcgccgac
gtgcgcattctagcggcgaccaatctcaatctcgaagacatggtccgtgacgggcgtttc
cgtgaagacctgctctatcgcctgaacgtcatcaccctgcacctgccgccactgcgcgag
cgcgccgaggacatcctgacgttggccgaccgcttcctcgcccgcttcgtcaaagagtat
gcgcgtccggcacgtggcttcagcgacgaggctcgcgaggcactgctcggctatcgctgg
ccgggcaacattcgcgagttgcgcaacgtggtcgagcgggcgagcatcatctgcccgcag
gaacgcgtggagatcagccacctgggcatggccgaacaaccggccaacaacgcgccacga
gtcggtgccgcgttgagtctcgatgagttggagaaggcgcacatcggcgccgtcctcgcc
accgccggcaccttggaccaagcggcgaaaacgctcggcatcgatgcctcgaccctgtat
cgcaagcgcaagcagtacaacctgtga
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