Pseudomonas germanica: J0G10_01250
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Entry
J0G10_01250 CDS
T08191
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf03030
DNA replication
pgf03410
Base excision repair
pgf03420
Nucleotide excision repair
pgf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J0G10_01250 (polA)
03410 Base excision repair
J0G10_01250 (polA)
03420 Nucleotide excision repair
J0G10_01250 (polA)
03440 Homologous recombination
J0G10_01250 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgf03032
]
J0G10_01250 (polA)
03400 DNA repair and recombination proteins [BR:
pgf03400
]
J0G10_01250 (polA)
Enzymes [BR:
pgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J0G10_01250 (polA)
DNA replication proteins [BR:
pgf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J0G10_01250 (polA)
DNA repair and recombination proteins [BR:
pgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J0G10_01250 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0G10_01250 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QYY82111
UniProt:
A0ABX8YSI9
LinkDB
All DBs
Position
complement(277764..280568)
Genome browser
AA seq
934 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYANLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDVELDDLQMGAEDPAKLYELYSLLEFKSWINDLDRDAKRLELSA
ASEPALAGDLFSAPAEEAPVAPAEAAYETILDQARFDVWLEKLSNAKLFAFDTETTGIDA
QQAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPSKLKVGQHAKF
DMNILANCAIGGDQSQGINVRGIAFDTMLESYVLNSTATRHDMDSLAQKYLDHTTVSFQD
IAGKGAKQLTFDQIALEQAGPYAAEDADITLRLHQTLFEKLSAIPSLASVLTDIEIPLVP
VLARIERQGAFVDAELLGIQSIELGNKMVALEREAFEIAGEEFNLGSPKQLGVILYEKLG
LPVLKKTAKGQPSTAEEVLAKLAEDDHRLPKVLMEHRSMSKLKSTYTDRLPEQINPRTGR
VHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIM
AHLSKDEGLMNAFRNNLDVHTATAAEVFKVELNEVTSDQRRGAKAINFGLIYGMGAQKLG
KDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGYVETFFGRRLYLPEINSNKPQ
ERAAAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDAKVILQVHDELVLEVREDLVE
QVSAEIRVHMSEAAKLDVPLLVEVGVGNNWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcttacctgtaccgcgcgtttcac
gcgctgccaccactgaccacctccaaaggcctgccgaccggtgcggtcaaaggcgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagcccgttcgccgtggtgttcgac
gccaagggcgggacatttcgcgatgaaatgtacgccgaatacaaagccaatcgcccgagc
atgcccgacgacatgcgcgtgcagatcgagccgctgcaccagagcgtgatcgccctcggt
ttcccgctgctgtgcgtggaaggcgtcgaggctgacgacgtgatcggcaccctggcgcgc
agcagcgcggcggcggatcgcccggtgatcatctccaccggcgacaaggacatggcgcaa
ctggtcgatggccacattactttggtcaacaccatgtccggtagctcgatggacgtggag
ggcgttaaggagaaattcggcgtcgctccggagcagatcatcgattatctggcgctgatg
ggcgattcgtccgacaacattccgggcgttcccggcatcggcccgaagactgcgtccggc
ctgttggtcggcgtcaacggcggcctcaccgagctgtacgccaatctcgacatcgtgccg
accctgccgattcgcggcgccaagaccctgccggccaagcttgaagagcacaaggagatg
gcgttcctctcctatcaactggcgaccatcaaggtcgacgtgccgctggacgtcgaactc
gacgacctgcagatgggcgccgaagacccggccaagctctacgagctgtactcgctgctg
gaattcaaaagctggatcaatgatctcgatcgcgacgccaaacgtctggaactgagcgca
gccagcgaacctgcgctggccggcgatctgttcagcgcaccagcggaagaagcgcctgtc
gctcccgccgaagctgcctacgaaaccatccttgatcaggcgcgcttcgacgtctggctg
gaaaaactgagcaacgccaagctgttcgccttcgacaccgaaaccaccggcatcgacgcg
cagcaagcgcagctggtcggcctgtcgttcgccgtgcaggccaacgaagccgcgtacatt
ccgctgacccactcctacatcggcgtgccggaacagctggatcgcgacaccgtactgcgc
gcactcaagccgattctcgaagacccgagcaagctgaaggtcggccagcacgccaagttc
gatatgaatattctggccaactgtgccatcggcggcgatcagagccaaggcatcaacgtg
cgcggcatcgccttcgacacgatgcttgagtcctacgtgctcaactccaccgccacccgc
cacgacatggacagcctcgcgcagaagtacctggatcacaccaccgtgagcttccaggac
atcgccggcaaaggcgccaagcagctgactttcgaccagatcgctttggaacaggccggg
ccgtacgccgccgaagacgctgatatcaccctgcgcctgcaccagacgctgttcgaaaaa
ctcagcgccatcccgagtctggccagcgttttgaccgacatcgagattccgctggtgccg
gtactggcgcgcatcgaacgccaaggcgcgttcgttgatgccgaactgctcggcattcag
agcatcgaactgggcaacaaaatggtcgcacttgagcgcgaagcgttcgagatcgccggg
gaagaattcaaccttggctcgccgaagcagttgggcgtgattctctacgagaaactcggc
ctgccagtattgaagaagaccgccaagggccaaccgtccaccgctgaagaagtgctagcg
aagctcgctgaagacgatcaccgcttgccgaaggtgctgatggagcaccggtcgatgagc
aagctgaaaagcacctacaccgatcgcctgccggagcagatcaatccgcgcaccgggcgt
gtccacacctcgtatcaccaggctgtggcatcgaccgggcgtttgtcctcgagcgatcca
aacctgcagaatatcccggtgcgcaccgcggaaggccggcgcatccgtcaggcgttcgtc
gcgccaaagggctacaaactgctggcggcggactattcgcagatcgaactgcggatcatg
gcgcacctgtccaaggacgaaggcctgatgaatgccttccgcaacaatctggacgtgcac
accgccaccgctgccgaagtgttcaaggtcgaactcaacgaagtgacctccgaccagcgc
cgtggcgccaaggcgatcaacttcggcctgatctacggcatgggcgcacagaagctcggc
aaggacatcggcgtcgacaccaagaccgccaaggcttatatcgacacctacttcgcccgt
tatccgggggttcgcgaatacatggatcgcacccgcgcacaggcggcggatcagggttat
gtcgagaccttcttcggtcgtcgtctgtacctgccagaaatcaactcgaacaagccgcag
gaacgtgccgctgccgagcgcacagcgatcaacgcgccgatgcagggcacggctgccgac
atcatcaagaaagccatggtggcggtggataactggttggcgacatccgggctggacgcc
aaagtcatcctgcaggtgcacgatgaactggtgctggaggttcgtgaggatctggtcgaa
caagtcagtgccgagattcgcgtgcacatgagcgaggcggcgaaactggatgtgccgctg
ctggtcgaagtgggtgtgggcaacaattgggatgaggctcactga
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