Pseudomonas germanica: J0G10_04590
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Entry
J0G10_04590 CDS
T08191
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J0G10_04590 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgf03400
]
J0G10_04590 (recC)
Enzymes [BR:
pgf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J0G10_04590 (recC)
DNA repair and recombination proteins [BR:
pgf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J0G10_04590 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QYY82737
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All DBs
Position
1071624..1075076
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AA seq
1150 aa
AA seq
DB search
MPDAQSLNAAFMVVQSNSLDELRSLVISIMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDLGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPQV
IDRPHFEPLQRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAEGRHQLRTVRGE
VKPLPPTSCWQAELWRALLDDVGEQGMAQSRAGVHQRFIERINNLNEAPAGLPSRVIVFG
ISSLPAQVLEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQSRKTGMPAVL
DPETLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRAAFRDGRIDLFSETQPHNLLNQL
QDDILELRPLNETREHWPAVDLAQDESIRFHIAHSAQREVEILHDQLLARFSANPDLRPR
DVIVMVPDVDSYAPHIRAVFGQLDRHDSRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVEERDLPTLHRWIEGAGVRWGMNAEQRAGLGLPDELEQNS
WHFGLRRMLLGYAVGSANACEGIEPYDEIGGLDAALMGPLVALLDALELAHQQLTQPAQP
KEWGYRLQALMQLFFKASNEHDDYLLTQLEELRETWLETCEAVGLADELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSGYRP
GDRSRREDDRYLLLEALLSARNQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWRLLD
ENRDLLSAMTQEHPLQPFSARYFHEGDQLFSYASEWQVLHQQHEPQNEAQLLTPYVQEDP
LSLALLQDFLRNPVRHFFTQRLKVYFEAAEAPLADEEPFVLDALQRYTLSDSLLEAALRQ
PDNVEQALTAQARRLQNSGLLPMAGFGECLQRELIEPLPDLLQRYQQLLTLWPTPLSSAT
PVNLELQGLRLEGWLAGLHQRADSGLLSVTTIPNSIGSIKSRKWHRLTKPWVNHLVACAS
GLSLSTALVASDDTLLLEPMEPDRAVRFLGDLLLAWQAGMRQPLPIAVKTAFAWLAQSDP
LKAEAAARKAYEGDGQTSEGERRESPALSRQFADFEALLADETFSGWCDALYRPLFEAPW
RSLSTEGARA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcccagtccctcaacgctgcattcatggtggtccagagcaatagtctggac
gaactgcgcagccttgtgatcagcataatgcggcgctatccactggccccgctggaaaac
gaaatcgctctggtgcagagcaacggtattgcgcagtggctcaaactggccttggctgaa
gatccagaggacgacgacctcggaggttgcggtattgctgccgcgatagatgtgcaactg
ccgggcagtttcatgtggcagctttaccgcatggtattgggtcgagatgaaattcctccc
aaatccctgctcgataaggccccgctgacctggcgccttatgcgtctgctgccacaggtc
attgatcgcccgcatttcgagccgttgcaacgcttccttacccatgacaccgacctgcgc
aagcgctatcaattgtccgaacgcttggcggatctgttcgaccaatatcaggtgtaccgg
gccgactggctggaagactgggccgaaggccggcatcaattgcgcactgtcagaggtgaa
gtaaaaccactgcccccgaccagttgctggcaggcagaactgtggcgtgcgctgctggat
gacgtgggtgagcaaggtatggcgcagagtcgtgccggcgttcatcaacggtttattgag
cgcatcaacaacctcaacgaagcacctgcgggattgccttcgcgagtgatcgttttcggg
atttcttcgctgccagcccaagtacttgaagcgctggccgggctcgcgcgtttcagtcag
gttctgctgtgtgtacacaacccgtgccggcaccattgggccgacattgtcgccgacaag
gatctgctgcgccatcaatacaaacggcaatcgcgcaagaccggaatgccagcagtgctg
gatcctgaaacactgcatcaacacgcccatccactattggctgcgtggggcaaacagggc
cgggactacatcaacctgctcgacagttatgacgatcccaatagctatcgggcggctttt
cgcgacggccgcatagacctgttcagcgaaactcagccgcacaatctgctcaatcaactc
caggacgatatcctggagttgcgcccactcaacgaaacccgtgagcactggcctgctgtc
gatctggcacaggacgagtcgatccgctttcatattgcccacagcgcacaacgtgaagtc
gaaatactgcatgaccagctcctggcacgcttcagtgccaacccggatctgcgtccgcgc
gatgtgatcgtcatggtgcctgacgtcgatagctatgccccgcatatccgcgcagtattt
ggtcagcttgaccggcatgattcgcggtttattcccttcacgttggcggatcaggggcaa
cgtggccgtgatccactgctgatcgcggtcgaacacctgctcaagcttcccgacagtcgt
ttcccggtcagtgaaattctcgacctgctcgacgttcctgcactccgcgctcgctttggt
gtagaagagcgcgacctgccgacactgcatcgctggatcgaaggcgcgggcgtgcgttgg
ggcatgaatgccgagcagcgagcgggtctgggtttacccgacgagcttgagcaaaacagc
tggcatttcggtctgcgtcgcatgcttctgggctacgccgtcggcagtgccaatgcatgc
gaagggattgaaccctacgatgagatcggcggactcgacgccgcactgatggggccgttg
gtggctctgctcgatgcgctggaactggcccaccagcagctcacccaacccgctcaaccc
aaggagtggggataccgtttgcaagcgctgatgcaactgttcttcaaggccagtaacgag
catgacgactacttgttgacccaactcgaagagctgcgcgaaacctggctggaaacctgt
gaggctgtaggtctggcggatgagctaccactgaccgtggttcgtgaagcctggctcgcc
ggcctggaccaagggcgtttgtctcagcggtttctggccggtgccgtgaatttttgtacg
ctgatgcccatgcgcgccattccattcaaactggtctgcctgctggggatgaacgacggc
gactatccccgcgcgcagccgccgctggacttcgacctcatgggcagcggctaccgtccg
ggagatcgctcacgacgtgaagatgaccgttatcttttgcttgaggcgcttttgtcggcg
cgcaatcagctgtacatcagctgggtggggcgcagcatccgcgacaacagtgaacgaccg
gcctccgtgttgattggccaactgcgcgatcacctcgccagcggttggcgattgctcgac
gaaaatcgcgatctgttgagtgccatgacgcaagagcacccgctgcaaccgttcagtgcg
cgctattttcatgagggcgaccaactcttcagctatgccagcgaatggcaggttctgcat
caacagcatgagcctcaaaacgaagcgcagttactcactccttatgtgcaagaagacccg
ttgagcctagcgttgttgcaggactttttgcgcaacccggtccggcattttttcacgcaa
cgcctcaaggtgtatttcgaagcggccgaagcccccctggccgatgaagaacccttcgtg
ctggacgcattgcagcgttacacgctcagcgacagcctgctcgaagctgctctcaggcaa
ccggacaatgtcgaacaggcgctgactgcccaggcacgacgtctgcaaaacagcggtctg
ttgccaatggccgggtttggcgagtgcctgcagcgagagctgatcgaacctctgccggat
ctactgcagcgttatcagcaactgctgacattgtggccgaccccgttgagcagtgccacg
ccggtcaaccttgaactgcagggcttgcgactcgaaggctggctcgccggtttgcatcag
cgcgccgatagtggcctgttgtcggtcacgaccattcccaacagcattggctcgatcaaa
agccgaaaatggcatcgcctgaccaaaccctgggtcaatcatctggtggcctgcgccagt
ggactttccctgagcaccgcattggtggccagcgatgacacgctgctgcttgaaccgatg
gagccggatcgagcggtacgtttcctcggtgatttgctcctcgcctggcaggccgggatg
cgtcagccactgccgatcgcggtaaaaactgccttcgcgtggctcgctcagagcgacccg
ctgaaggccgaagcggccgcgcgtaaagcctatgaaggtgacgggcagaccagcgaaggc
gagcgccgcgagagcccggcgttgtcacggcaatttgccgattttgaggcattgcttgcc
gatgagacgttctccggttggtgtgacgccttgtatcgcccgttgtttgaagcgccctgg
cgttcgctgtccaccgaaggggctcgcgcatga
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integrated database retrieval system
