Pseudomonas germanica: J0G10_05065
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Entry
J0G10_05065 CDS
T08191
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00220
Arginine biosynthesis
pgf00240
Pyrimidine metabolism
pgf00250
Alanine, aspartate and glutamate metabolism
pgf01100
Metabolic pathways
pgf01110
Biosynthesis of secondary metabolites
pgf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
J0G10_05065 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
J0G10_05065 (carB)
00220 Arginine biosynthesis
J0G10_05065 (carB)
Enzymes [BR:
pgf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
J0G10_05065 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
Epimerase
Motif
Other DBs
NCBI-ProteinID:
QYY82825
LinkDB
All DBs
Position
1177543..1180764
Genome browser
AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDM
ADATYIEPIKWQTVAKIIEKERPDAVLPTMGGQTALNCALDLEREGVLEKFGVEMIGANA
DTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLGFPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLP
RFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKLDLSNPES
MSVLKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVKTLG
LSAIDRDLMFKLKRKGFSDQRLAKLLGVTEKNLRTHRQKLEVFPVYKRVDTCAAEFATDT
AYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAVRAAAKIGYPLVVRPSYVLG
GRAMEIVYKEDELKRYLRDAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGKDVVIGAIMQH
IEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIE
VNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP
GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVA
RDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQ
SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacattaaaagcatcctgattctcggcgctggcccgatcgttatc
ggccaggcctgcgaattcgactactccggcgcccaggcctgtaaagccctgcgcgaagag
ggttaccgcgtcatcctggtgaactccaacccggccaccatcatgaccgacccggacatg
gcggacgctacctacatcgagccgatcaagtggcagaccgttgccaagatcatcgaaaaa
gaacgcccggacgcggtgctgccaaccatgggcggccagactgctctgaactgcgccctg
gatctggagcgcgaaggcgttctggagaagttcggcgtggaaatgatcggcgccaacgct
gacaccatcgacaaggctgaagaccgttcgcgtttcgacaaggcgatgaagtccatcggc
ctggcgtgcccgcgttccggtatcgcccacagcatggaagaagccaacgcggttctcgaa
accctgggcttcccgtgcatcatccgtccgtccttcaccatgggcggcaccggtggcggt
atcgcgtacaaccgtgaagagttcgaagaaatctgcgcccgtggtctggacctgtcgccg
accaaagagctgctgatcgacgaatcgctgatcggctggaaagaatatgaaatggaagtt
gtccgcgacaaaaaggacaactgcatcatcgtctgctcgatcgaaaacttcgacccgatg
ggcgtgcacaccggtgactcgatcaccgtggctccagcacaaaccctgaccgacaaggaa
taccagatcctgcgtaacgcctccctggcggtactgcgcgagatcggcgtcgagactggc
ggttccaacgttcaattcggtatctgcccgaacactggccgtatggtcgtgatcgaaatg
aacccgcgcgtatcgcgttcctcggcactggcttcgaaagccaccggtttcccgatcgcc
aaagtcgcggccaaactggctgtgggttataccctcgacgaactgtcgaacgacatcacc
ggcggcaagaccccggcgtccttcgagccgtcgatcgactacgtcgtcaccaagttgcca
cgcttcgccttcgagaagttcgccaaggctgacgcacgcctgaccacgcaaatgaagtcg
gtcggtgaagtcatggccatcggccgtacattccaggagtccctgcagaaagctctgcgc
ggtctggaagtcggcgtttgcggtctggacgagaagctcgacctgagcaacccggaaagc
atgagcgtgctcaagcgcgaactgaccgtgccgggcgccgagcgtatctggtacgtggca
gacgctttccgcgctggcctgtcggtcgaagacatcttcggcatgaacatgatcgacccg
tggttcctggtgcagatcgaagatctgatcaaggaagaagagaaggtcaagaccctcggt
ctgtccgctatcgaccgcgacctgatgttcaagctcaagcgtaaaggcttctccgatcag
cgtctggccaaactgttgggcgtgaccgagaagaacctgcgcactcatcgccagaagctg
gaagtgttcccggtctacaagcgcgttgacacctgcgccgccgagttcgccactgacacc
gcttacctctactccacctacgaggaagagtgcgaagctgcgccgtcgggtcgcgacaag
atcatgattctgggcggtggtccgaaccgtatcggccagggcatcgagttcgactactgc
tgcgttcacgctgctctcgccctgcgcgaagacggctacgaaaccatcatggtcaactgc
aacccggaaaccgtttccaccgactacgacacttccgaccgtctgtacttcgaaccggta
actctggaagacgtgctggaaatctgccgcgtcgagaagccaaaaggcgtgatcgtccag
tacggcggtcagactccgctgaaactggctcgtgccctggaagccgctggcgtgccgatc
atcggcaccagcccggacgccatcgaccgcgctgaagaccgtgagcgtttccagcaaatg
gttgagcgcctgaacctgcgtcagccgccaaacgccaccgtgcgcagcgaagacgaagct
gttcgtgctgccgcgaagatcggttatccgctggtggtgcgcccgtcttatgtactgggc
ggccgtgcgatggaaatcgtttacaaggaagacgagctcaagcgttacctgcgtgacgcg
gtgcaagtgtccaacgacagccctgtgctgctcgaccacttcctcaactgcgccatcgaa
atggacgtggatgcggtctgtgacggcaaagatgtggtgatcggcgcgatcatgcagcac
atcgaacaggctggcgttcactccggtgactccgcgtgctcgctgccgccgtactcgctg
ccggcgcacatccaggacgagatgcgcgaacaggtcaagaaaatggctctggaactcggc
gttgtcggcctgatgaacgtgcagttggcgctgcaaggcgaagacatctacgtcatcgaa
gtcaacccgcgcgcttcccgtaccgtaccgttcgtgtcgaagtgtatcggtgtctccctg
gcgatgatcgctgcccgcgtgatggccggtaagaccctgaaagaaatcggcttcaccaaa
gaaatcatcccgaacttctacagcgtgaaagaggcggtgttcccgttcgccaagttccct
ggcgttgacccgattctcggcccagagatgaagtcgaccggtgaagtgatgggcgtcggc
gacaccttcggtgaagcattcgccaaagcccagatgggcgccagcgaagtgctgccgacc
ggcggcactgcgttcatcagcgtgcgtgacgacgacaagccactggttgcaggcgtggcc
cgcgatctgatcaacttgggcttcgaagtggtagccactgccggcactgccaagctgatc
gaggccgcaggtctgaaagtgcgccgtgtgaacaaagtgaccgagggtcgtccgcacgtg
gtcgacatgatcaagaatgacgaagtcaccctgatcatcaacaccactgaaggtcgtcag
tcgatcgctgattcgtactccattcgtcgtaatgccttgcagcacaagatttactgcaca
accactattgctgctggcgaagctatctgtgaagcgctgaagttcggtcctgaaaaaacc
gtgcgccgcttgcaggatctacacgcaggattgaaggcatga
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