Pseudomonas germanica: J0G10_05155
Help
Entry
J0G10_05155 CDS
T08191
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0G10_05155 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgf03019
]
J0G10_05155 (pnp)
03016 Transfer RNA biogenesis [BR:
pgf03016
]
J0G10_05155 (pnp)
Enzymes [BR:
pgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J0G10_05155 (pnp)
Messenger RNA biogenesis [BR:
pgf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J0G10_05155 (pnp)
Transfer RNA biogenesis [BR:
pgf03016
]
Prokaryotic type
tRNA degradation factors
J0G10_05155 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
TraK_C
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QYY82841
UniProt:
A0ABX8YS75
LinkDB
All DBs
Position
1195312..1197417
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWNWAPAPEA
TELLGAIRAEFGEAISQAYTITIKADRYARLGELKEQVVAKLSGEEGQPSSSEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVSAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcaatcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgta
ttggtgactgtagtcggtgcaaaacaagccgatccgggcaagggcttcttccctttgtcc
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccactgttccctgaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaaaaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tcgggcattccgttcgacggcccgatcggcgccgctcgtgtagctttccacgaaagcacc
ggctacctgctgaacccgacttacgagcagcaagctgcttcgagcctggacatggtcgtt
gccggtacttccgacgccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtactgtttgctcacgacgaattccaggttgtgatcaacgctgtg
aaagaactggccgctgaagctgccaagccaacctggaactgggctccggctccagaagcc
accgaactgctgggcgctatccgtgccgagttcggcgaagcgatctcccaggcttacacc
atcaccatcaaggccgaccgttacgctcgcctgggtgagctgaaggagcaagtcgttgcc
aagctgtccggtgaagaaggccagccttcgtccagcgaagtcaaagctgctttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgtaaacggcaagccacgtatcgacggtcgc
gacaccaaaaccgtacgtccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tcggcgctgttcacccgtggtgaaactcaggctctggtcgttgcaacactgggtactgcc
cgtgacgcacaactgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggtgctggtcgtcgt
gaaatcggtcacggccgtctggcccgtcgttcggtttcggccatgctgccagccgctgac
gtgttcccgtacaccatccgtgtagtttcggaaatcaccgaatccaacggttcgagctcg
atggcttccgtttgcggcgcttccctggccctgatggatgctggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggtctggttaaagaaggcgagaaatttgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtagccggtaccgcc
aaaggcgttactgcgctgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaatatcctcggtcagatgaaccag
atcatcggtcagtcgcgtaccgaactgtcggccaacgctccgaccatgatcgcgatgaaa
atcgacaccgacaagatccgtgacgttatcggtaaaggtggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaagcggctgaagcagcacgtcagcgcgttctgggtatcaccgctgaagcc
gagatcggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccgggcaaggacggtctggtgcacatctcgatgctgagcgacgctcgcgta
gagaaagtgaccgacatcctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtggcagcggccaaggcttcgggc
gtttaa
DBGET
integrated database retrieval system
