Pseudomonas germanica: J0G10_06130
Help
Entry
J0G10_06130 CDS
T08191
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0G10_06130 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgf03019
]
J0G10_06130 (rhlB)
Enzymes [BR:
pgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J0G10_06130 (rhlB)
Messenger RNA biogenesis [BR:
pgf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J0G10_06130 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QYY83027
LinkDB
All DBs
Position
complement(1416648..1418126)
Genome browser
AA seq
492 aa
AA seq
DB search
MTVLKALKKMFGKSEAEQLAPVPSAPSHAPGHRNDAPQADRPAHVAAPKAEPQPAPAAPI
AAEPARSEAPKPARPRREPKPKAPVIPWKLEDFVVEPQEGKTRFHDFKLSPELMHAIQDL
GFPYCTPIQAQVLGYTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRA
LIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLL
DFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVM
NLAKQWTTDPAIVEIEITNVANENVEQHIYAVAGADKYKLLYNLVNDNGWERVIVFANRK
DEVRRIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGIS
HVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEEKLGRKISCETPPT
HLLRAVERKRPQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaagaagatgttcggtaaaagcgaggctgagcagctcgcg
ccagttcccagtgcgccgtcgcacgcccccggtcatcgcaacgatgcgccacaggccgac
cgccccgctcacgtagcggcaccgaaggcagaaccacaacctgcaccggccgcgccaatc
gctgccgaacctgcccgcagcgaagcgccgaaaccggccagaccgcgccgcgaaccgaag
cccaaggcaccggttattccgtggaaactcgaggatttcgtcgtcgagccacaggaaggc
aaaacccgcttccacgatttcaagctgtctccagaactgatgcacgccatccaggatctg
ggttttccgtactgcactccgattcaggcgcaggtcctgggttacaccctcgccggcaaa
gacgccattggccgtgcgcagaccggcaccggtaaaaccgccgcgttcctgatctcgatc
atcacccagctgctgcagaccccgccgccgaaagaacgctacatgggcgaaccccgtgcg
ctgatcatcgcgccgacccgtgagctggtggtacaaatcgccaaggacgccgctgacctg
accaagtacaccggcctcaacgtcatgacgtttgttggcggcatggacttcgacaagcag
ctcaagcacctcgaagcgcgtcactgcgacatcctcgtcgccacaccgggccgtctgctc
gactttaaccagcgtggcgacgtgcacctggacatggtcgaagtgatggtgctggacgaa
gccgatcgcatgctcgacatgggtttcatcccgcaggtacgtcagatcattcgccagacg
ccgccgaaatccgagcgccagaccttgctgttttccgcgaccttcaccgaagacgtgatg
aacctcgccaagcagtggaccaccgaccctgcgatcgtcgaaatcgaaatcaccaacgtt
gccaacgaaaacgtcgagcagcacatctatgcggtggccggtgccgacaagtacaaactg
ctctacaacctggtcaacgataacggctgggaacgagtgatcgtgtttgccaaccgcaag
gacgaagtacgccgcatcgaagaacgcctggtgcgcgatggcatcaacgccgcgcaactg
tccggcgatgtgcctcagcacaaacgcatcaagaccctggaaggtttccgcgaaggcaag
attcgcgtgctggtcgccaccgatgtggccggtcgcggcatccacatcgacggcatcagc
cacgtgatcaacttcaccctgccggaagtcccggacgactacgtgcaccgcatcggccgg
accggtcgtgctggcgccgacggtgtgtcgatcagcttcgccggtgaggacgactcctac
cagttgccgtccatcgaagagaagctcggtcgcaagatcagctgtgaaacgccgccgacg
catctgttgcgcgcggttgagcgcaagcgtccgcagtaa
DBGET
integrated database retrieval system
