Pseudomonas germanica: J0G10_06475
Help
Entry
J0G10_06475 CDS
T08191
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pgf
Pseudomonas germanica
Pathway
pgf03410
Base excision repair
pgf03430
Mismatch repair
pgf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0G10_06475 (recJ)
03430 Mismatch repair
J0G10_06475 (recJ)
03440 Homologous recombination
J0G10_06475 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgf03400
]
J0G10_06475 (recJ)
DNA repair and recombination proteins [BR:
pgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J0G10_06475 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J0G10_06475 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J0G10_06475 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QYY83095
LinkDB
All DBs
Position
1489751..1491460
Genome browser
AA seq
569 aa
AA seq
DB search
MRIEPRQLPATLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGINAAVDLL
VTALEQRQRILIVGDFDADGATASTVGMLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALTREPQLLITVDNGISSVEGVAAAKKAGLKVLITDHHLPGDELPLADALVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYENKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFIVGPRLNAAGRLDDMSLGIEC
LLTADANLAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALSVVAAQHPNLIAKYGG
HAMAAGLTLPQENFPLFAEAFDAEVRRQLREEDLTGRMLTDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDRDIWPNPTIQ
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacctcgtcaactgcctgccactctgccgtttctcggtgatctgccaccc
ttgctgacccgcttgtacgcggcgcggggcgtgcagtccgaggcggagctggacaagagc
ctggcgcggttgatcccgtttcagcaactcaagggcatcaatgcggcggtagacctgctg
gtgacggcgctggagcaacgccagcgcatcctcatcgtcggcgacttcgacgcggacggg
gcgaccgccagcactgtcggcatgctcggtttgcgcttgctcggtgcggcgcatgtcgac
tatctggtgccgaaccgcttcgaatatggctacggcttgaccccggaaatcgtcgaggtc
gcactgacccgcgagccgcaattgctgatcaccgtcgacaacggcatctccagcgtcgaa
ggcgtggccgcagccaaaaaggctggcctcaaagtactgatcaccgaccaccacttgccc
ggcgatgaactcccgctggccgatgcgctggtcaacccgaaccagcccggatgcgaattc
ccgagcaaggcgctcgccggcgtcggggtgattttctatgtgttgatggcgttgcgcgcg
cgcctgcgcagccttggctggtacgagaacaagcctcagccgaacatcggcgaactgctt
gacctggtggcgttgggcagcgtcgccgacgtggtgccgctggacgccaacaatcggatt
ctggtgcatcagggcctcgagcggattcgcgccgggcgcgcacggccggggatcaaagcg
atccttgaagtggccaagcgagatgctgcacgcattacctccaccgatctcgggtttatc
gttggcccacgcctgaacgcggccgggcgtctggatgacatgagcctgggcatcgaatgc
ctgctcactgccgacgccaacctggcccgggaaatggccgcgcaactggacggcatgaac
caggatcgcaagtctatcgaacaaggcatgcagcgcgaggcgctggcgcagctcaaggac
ttgccggtcgaatcgatgccgtttggtctgtgcctgttcgacccggagtggcaccaggga
gtgatcgggattctcgcgtcgcggatgaaagagcgctatttccgtccgaccattgctttc
gccgatgcgggagatggtttgctaaaaggctcgggccgttcggtacagggcttccacatt
cgtgacgcgttgagcgtggtggcggcgcagcatccaaacctgatcgccaagtatggtggc
cacgcaatggccgctggtctgaccctgccgcaggagaattttccgcttttcgccgaggcc
tttgacgctgaggtgcgtaggcaacttcgcgaagaagacctgaccgggcgcatgctaacc
gatggcacgctggcggttgaagaattccacctcgaactggcccgcgccttgcgccatgcc
gggccttgggggcagcacttcccggagccgctgtttcatggcgtgttccagttggtcgaa
caacgagtggtcggcgaacggcacctgaaagtggtgctgaagagcgaatgtggctcggtg
aagctggatggtattgcctttggcgttgaccgcgatatctggccgaacccgacgattcag
tgggttgaactggcttataagctcgacgttaacgagtttcggggtaacgagactgttcag
ttgatgattgcccacatcgaaccgcgctga
DBGET
integrated database retrieval system
