Pseudomonas germanica: J0G10_06725
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Entry
J0G10_06725 CDS
T08191
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00300
Lysine biosynthesis
pgf01100
Metabolic pathways
pgf01120
Microbial metabolism in diverse environments
pgf01230
Biosynthesis of amino acids
Module
pgf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J0G10_06725 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgf01002
]
J0G10_06725 (dapE)
Enzymes [BR:
pgf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
J0G10_06725 (dapE)
Peptidases and inhibitors [BR:
pgf01002
]
Metallo peptidases
Family M20
J0G10_06725 (dapE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
QYY83142
UniProt:
A0ABX8YUZ8
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All DBs
Position
complement(1547294..1548445)
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AA seq
383 aa
AA seq
DB search
MTAHADLSPTLQLAIDLIRRPSVTPVDADCQKQMMQRLGDAGFSLEPMRIEDVDNFWATH
GNNDGPVLCFAGHTDVVPTGPVTAWQIDPFNALIDEHGMLCGRGAADMKGSLASMTVATE
RFVADYPNHKGKVAFLITSDEEGPAHHGTKAVVERLAARNERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVKGIQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNVNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHDLDWHIDWALSGLP
FLTEPGALLDAVSASIKDITGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctttcgccgaccctccaactcgccatcgacctgatccgccgt
ccgtccgtgacgccggtcgacgccgattgccagaagcagatgatgcagcgcctgggcgat
gccggtttcagcctcgagccgatgcgcatcgaagatgtggataacttctgggcgacccac
ggcaacaacgacggcccggtgctgtgcttcgccggccacaccgacgtggtgccgaccggc
ccggtcacggcgtggcagatcgacccgttcaacgcgctgatcgacgaacacggcatgctc
tgcggccgtggcgcggcggacatgaaaggcagcctggcgtcgatgaccgtcgccaccgag
cgctttgtcgctgactacccgaaccacaagggcaaggtcgcgttcctgatcaccagcgac
gaagaaggcccggcgcaccacggcaccaaggctgtggtcgagcgtctggcagcacgcaac
gagcgtctggactggtgcatcgtcggcgaaccgtcgagcaccactttggttggcgacgtg
gtgaaaaacggccgtcgcggctcgctcggtgccaagctcaccgtcaaaggcattcagggc
cacgtagcctatccgcacctggcgaagaacccgatccacctcgctgctccggcgctggcc
gaactggccgccgagcactgggatcatggcaacgatttcttcccgccgaccagtttccag
atctccaacgtcaattccggcactggcgcgaccaacgtgattccgggtgatctggtggcg
gtgttcaacttccgcttctccaccgaatcgaccgtcgaaggcctgcagaaacgcgtggcc
gatattctcgacaagcacgatctggactggcacatcgactgggcactgtccggcctgccg
ttcctcaccgaaccaggcgcactgctcgacgcggtgtcggcgagcatcaaggacatcacc
ggtcgcgagactaaagcgtccaccagcggcggaacgtccgacggccgtttcatcgcgacc
atgggcacgcaagtggttgaactgggcccggtcaacgcgaccatccaccaggtcaacgaa
cgcgtactggcagccgatctcgacgtactgaccgagatctactaccagaccctgatcaag
ttgctcgcctga
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