Pseudomonas germanica: J0G10_06915
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Entry
J0G10_06915 CDS
T08191
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgf03016
]
J0G10_06915 (truD)
Enzymes [BR:
pgf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
J0G10_06915 (truD)
Transfer RNA biogenesis [BR:
pgf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J0G10_06915 (truD)
Prokaryotic type
J0G10_06915 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QYY83178
LinkDB
All DBs
Position
1592495..1593553
Genome browser
AA seq
352 aa
AA seq
DB search
MNELQLLGPRAYGEPLGSGVLKAIAEDFQVDEVLDIPFSGDGEHLWIWIEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTTRHKR
KLQRGAHSANGFTLRLTQFDGDKAAIEQRLQLIAQQGIPNYFGAQRFGHDGGNVVDARSW
AARKALPEQRNVRSRLLSTARSFLFNKVLAARVADGTWQKAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPTAGVVHELEQGIAADEAELRDWLIHAGMSHERRI
LRLPIAGLTWHYPQPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaattgctcggcccgcgcgcctatggcgaacccctcggcagtggggta
ctgaaagccatcgctgaagattttcaggtcgatgaagtcctcgatatcccgttcagcggc
gacggtgaacacctgtggatctggatcgagaaacgcggcctcaacactgaagaagccgca
cggcgtatcgccaaggctgccggtgtgccgttgcgcacggtcagctatgccggcctcaag
gatcgtcaggcgctgactcgccagtggttcagcgtgcaattgccgggcaaggccgatccg
gatttgtcggcggcggaaaacgacacgctgaagattctcaagaccactcgccacaaacgc
aaactgcaacgcggtgcgcattcggccaacggtttcaccttgcgtttgactcagttcgat
ggcgacaaagcagcgattgagcagcgtctgcagctgatagcccaacaaggcatccccaat
tatttcggcgcccagcgtttcggccacgacggcggcaatgttgttgatgcgcgttcgtgg
gcggcgcgcaaggcgttgccggagcaacgcaatgttcgttcgcgcctgctctcgaccgcg
cgcagttttctcttcaacaaggtgctcgccgcacgagtggccgatggcacctggcaaaaa
gcccaggtcggcgacctgctcgcgttcaccgacagccgcagttttttcccggccggagaa
gctgaatgcagcgacccgcgtctggcgattctcgatctgcacccgaccggtcctcagtgg
ggcgaaggtgactcgccgaccgcaggcgttgtccatgaattggagcaggggatcgccgcc
gatgaagcagagctgcgcgattggttgattcatgccggcatgagccacgaacgtcgcatc
ctgcggctgcccattgccgggttgacgtggcattatccccagcctgacattctgcaactg
gaattcgtcctcccggccggatgcttcgccaccgtattggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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