Pseudomonas germanica: J0G10_08780
Help
Entry
J0G10_08780 CDS
T08191
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00260
Glycine, serine and threonine metabolism
pgf00460
Cyanoamino acid metabolism
pgf00630
Glyoxylate and dicarboxylate metabolism
pgf00670
One carbon pool by folate
pgf00680
Methane metabolism
pgf01100
Metabolic pathways
pgf01110
Biosynthesis of secondary metabolites
pgf01120
Microbial metabolism in diverse environments
pgf01200
Carbon metabolism
pgf01230
Biosynthesis of amino acids
pgf01240
Biosynthesis of cofactors
pgf04981
Folate transport and metabolism
Module
pgf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J0G10_08780
09102 Energy metabolism
00680 Methane metabolism
J0G10_08780
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J0G10_08780
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
J0G10_08780
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
J0G10_08780
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
J0G10_08780
Enzymes [BR:
pgf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
J0G10_08780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QYY83533
LinkDB
All DBs
Position
complement(1984069..1985418)
Genome browser
AA seq
449 aa
AA seq
DB search
MAVITEPLKNQADMLRRGLADLRAEDAELAAILDAEVTRQQHTLSLASSSCAVQPRTLAA
SASVLVNVTAEGMSGKRHSAGCENVELVESLAIRRARQLFGAQYANVQPHSASNAIYQVL
TALLEPGDTLLGMAVEHGGHLTHGSLAAFSGAYYKAIQYGTTSDGLIDYDKVRLLALAHR
PRVILCGATAYSRVVDFKRFREIADEAGAILLADISHIAGLVATGRHPGPIDAAHVTVTC
THKQLAGPRGGVILSGRDANTKIPGLRTTFSRLLDQAVYPRMQGALAANMIAAKAAALGY
AMSAEFDACMAQIRSTADEMVKAFQAKDYEVVGDCSENHTVLVRLRGGITGAIAEAALGH
CGIIVNKHRLPDDPRSALVTSGLRIGTAALAQRRVDVHGSRQIVDLIVRVLNTVAPLGEQ
DYTLEPLLLAQFRSEVETLCRDYPLADYQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcattactgaaccgctcaagaaccaggctgacatgttgcgtcgtggcctggcg
gatcttcgcgcagaagacgccgaactggcggccattctcgacgctgaagtcacgcgtcaa
cagcacacgctttcactggcctcctcctcctgcgccgtccagccgcgaaccttggcggcc
tctgcttccgtgctggtcaacgtgacggcagagggcatgtccggcaagcgccacagtgca
gggtgcgagaacgtcgaactggtcgagtcgctggccatccgccgagcgcggcaactgttc
ggcgcgcaatacgccaacgtgcagccacactcagcgtcgaacgctatataccaagtcctt
acggccttgctggagcctggcgacaccttgctgggtatggcagtggaacacggtggtcat
ctcacgcatggcagcctcgcggcgttttcgggcgcctactacaaggcgatccagtacggc
acgacatccgacggtctcattgattacgacaaagtgcgtctgctggcgctcgcccatcgc
ccacgcgtcatcctctgcggcgccaccgcctattcacgcgtagtcgacttcaagcggttt
cgcgaaattgccgatgaagccggcgccatcctgctcgccgacatttcgcatatcgccggg
cttgtggccaccggacggcatccaggtccgatcgacgccgcacatgtcaccgtcacctgc
acgcacaagcaactcgccggacctcggggtggcgtgatcctcagcggtcgggacgccaac
accaagatccccggcttgagaaccaccttcagtcgcctgctggatcaagccgtttacccg
cgcatgcagggcgcgctcgccgccaacatgatcgcagcgaaggctgccgcgctgggttac
gcaatgtccgcagaattcgatgcctgcatggcacagatccgcagtacggcggatgaaatg
gtcaaagcgtttcaggccaaggattatgaggtggtcggcgactgcagtgaaaaccacaca
gtgctggttcgcttgcggggtggcatcacaggggctatcgcggaggcggcgctgggacac
tgcgggatcatcgtcaacaaacatcgcctacccgacgatccccgttcggcacttgtcacc
agcgggctgcgtatcggcaccgcggctctagcgcaacgccgggtcgatgtccacggcagc
cgccagatcgtcgatttgatcgtgcgggttctgaatacggtagcgccgctcggcgaacag
gattacacgctggaacctctgctcctcgcgcagtttcgctcagaggtcgaaaccctgtgc
agggactatcctctcgccgactatcaatag
DBGET
integrated database retrieval system