Pseudomonas germanica: J0G10_11755
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Entry
J0G10_11755 CDS
T08191
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgf03000
]
J0G10_11755 (rtcR)
Transcription factors [BR:
pgf03000
]
Prokaryotic type
Other transcription factors
Others
J0G10_11755 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
NACHT
MCM
AAA_30
ABC_tran
AAA_7
BrxC_BrxD
AAA_19
AAA_2
ATPase_2
bpMoxR
AAA_14
IstB_IS21
AAA_33
TniB
T2SSE
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QYY84080
LinkDB
All DBs
Position
complement(2627745..2629349)
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AA seq
534 aa
AA seq
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MPNKQTVAIGFIGATLDRVGKGANRWSHWRPSVGLCQQQDVLINRLELIHGIDARDVSLA
ERVRVDIQQVSPETEVRLHPMSLRNPWDFEEVYGALHDFTTAYDFDTEREDYLVHITTGT
HVAQICWFLLTEARYLPARLIQTSPAKRTSESDHAIGTHALIDLDLSRYDRIASRFANKR
LEGLEFLKSGIATRNAAFNRSIEQIERVAVRSKAPMLLIGPTGAGKSFLARRIYELKRSR
HQMHGRFVEVNCATLRGDGAMSALFGHVKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
ADEQAMLLKAIEEKRFFPLGSDKEVESDFLIIAGTHRDLRSRVADGLFREDLYARINLWT
FDLPGLAGRREDIEPNIDFELERHAREHGQLVRFNLEARRSYLAFASSREAAWLGNFREL
SASITRMATLADSGRIDEAQVQEEIDRLRYAWGLAQPQAISGELPGDAESMDLFDRLQLK
AVIEVCRQADSLSDAGRRLFGISRQAKAQANDADRLRKYLGRFGLEWSQIVALK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacaagcaaaccgttgccatcggatttatcggtgccacccttgatcgcgtcggt
aaaggtgccaatcgctggagccattggcgccccagcgttggcctgtgccaacagcaggat
gtgctgatcaaccggctcgagctgattcacggcatcgacgcccgtgacgtcagcctcgcc
gagcgggtgcgcgtcgacatccagcaagtttcgccagagaccgaagtgcgcctgcacccg
atgtcacttcgcaacccgtgggatttcgaagaggtctacggcgcactgcacgacttcacc
accgcctacgatttcgacaccgagcgcgaggactacctcgtccacatcaccaccggcacc
cacgtcgcgcagatttgctggttcctgctgaccgaggcgcgctatctgccggcgcggctg
atccagacctctccggccaagcgcaccagcgaaagcgatcacgccatcggcacgcatgcc
ctgatcgatctcgacctgtcgcgctacgatcgcatcgcttcgcgcttcgccaacaagcgc
ctcgaaggcctggagttcttgaagtccggcatcgccacacgcaacgccgctttcaaccgc
tcgatcgaacagatcgagcgcgtggccgtgcgctcgaaggcaccgatgctgctgatcggc
ccgaccggcgccggcaaatccttcctcgcccgacgcatctacgaactcaaacgcagtcgc
catcagatgcacgggcgttttgtcgaggtgaactgcgccacactgcgtggcgatggcgcg
atgtcggcgctgttcggccatgtcaaaggcgccttcaccggtgcgcagaacgctcgtgac
ggcctgttgcgcgccgccgatggtggaatgctgtttctcgatgagatcggcgagctgggc
gcagacgaacaagcgatgctgctcaaggcgattgaagaaaaacgcttctttccgctgggc
tcggacaaggaggtcgaaagcgatttcctgatcatcgccggcactcaccgcgacctgcgc
agccgggtcgctgatggcttgttccgcgaagatttgtacgcacgcatcaacctgtggacg
ttcgacctgcccggcctcgccggtcgccgcgaggacatcgaaccgaacattgatttcgag
ctggaacgtcacgcccgtgaacacgggcaactggtgcgcttcaacctggaagcccggcgc
agttatctggcgttcgccagctctcgcgaggcggcgtggctcggcaacttccgtgaactc
tccgcctcgatcacacgaatggcgaccctggccgacagcggacgtatcgacgaggcacag
gtgcaggaagaaattgatcggctgcgctacgcgtggggattggcacaaccgcaggcgatt
tcaggagagttgccgggggacgccgaaagcatggatctgttcgaccgcttgcaattgaag
gcagtgatcgaggtgtgccggcaggcggacagcttgtccgatgccggccgccgcctgttc
ggaatatcgcgccaggccaaggcacaagccaacgatgccgatcgactgaggaaatacctc
ggccggttcgggcttgagtggagccagatcgtcgccctcaagtga
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