Pseudomonas germanica: J0G10_13380
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Entry
J0G10_13380 CDS
T08191
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgf
Pseudomonas germanica
Pathway
pgf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J0G10_13380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgf03021
]
J0G10_13380
Transcription machinery [BR:
pgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J0G10_13380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
HTH_24
TnsD
GerE
HTH_11
LacI
HTH_7
HTH_Tnp_4
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
QYY84388
UniProt:
A0ABX8YXW1
LinkDB
All DBs
Position
complement(2977769..2978284)
Genome browser
AA seq
171 aa
AA seq
DB search
MSETLPANNANHLRAIEALYSGHHGWLYATLRKKLGNAMDAADLAQDTFTRILASQVTVI
EQPRAYLSCVAKGILVNWYQRKALERAYLEALAHVPAPEVPSPELRFMVLETLHEIDAML
DALPPLVKRAFLLSQISGLKYDDIAEQLGVSLITVKRYMKQAFVQCLLLVE
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacccttcccgcgaataatgccaatcacctgcgcgcgatcgaagccctgtac
agcggccatcacggctggctgtacgcgacgctgagaaaaaaactgggaaacgccatggat
gcggcggatctggcgcaggacaccttcacccgcatcctcgcctcgcaagtcaccgtcatt
gagcaaccgcgtgcgtatctgagctgcgtggccaaaggcattctggtcaactggtatcaa
cgcaaggcgctggaacgtgcctatctggaagccctcgcccatgtgccggcgccggaagtg
ccttcgccagaattgcgtttcatggtgctggaaaccctgcacgaaatcgacgcgatgctc
gacgccctgccgccactggtcaaacgcgcctttctgttgtcgcagatcagcgggctgaaa
tacgacgacatcgccgagcagttgggcgtatcgctgatcaccgtcaaacgctacatgaag
caagccttcgtgcagtgcctgttgctggtggagtga
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integrated database retrieval system
