Pseudomonas germanica: J0G10_13600
Help
Entry
J0G10_13600 CDS
T08191
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgf03000
]
J0G10_13600
Transcription factors [BR:
pgf03000
]
Prokaryotic type
Helix-turn-helix
GntR family
J0G10_13600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_27
MarR_2
HTH_24
HTH_IclR
HTH_Crp_2
Fe_dep_repress
TrmB
HTH_CodY
HTH_11
DUF6880
HTH_36
HTH_5
GMT-wHTH
HTH_41
Ribosomal_S25
MarR
HTH_29
HTH_28
HTH_23
TFIIE_alpha
FliX
HTH_20
HTH_54
Motif
Other DBs
NCBI-ProteinID:
QYY84430
LinkDB
All DBs
Position
complement(3023980..3024732)
Genome browser
AA seq
250 aa
AA seq
DB search
MKRQPLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLMPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLTDAVDIYELRCVLEGLIVQLFTLRAKAKDIKALE
KALDDNRKALKDGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGASNQEMEKMVEAIKSGDPLVAHQACVDHVRAAAAVALDYLKRKQEETGATPAMTLP
IALKEPRIGH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccagccactcgacgacagcttcaaggtcaatcgcaaccccgttaccctgcgc
gaaatcgtgctggataaactgcgtagcgcgatcatgaatttccagctcatgcccggcgat
cgtctggtcgagcgcgatctgtgcgatcgcctcggtgtaagccgtacgtcggtgcgtgaa
gccttgcgtcacctggaatccgaaggtctggtcgagttcgccgatgccaaaggcccgcgc
gtggcgatcatcaccctcaccgatgcggtcgatatctacgagttgcgctgcgtacttgaa
ggactgatcgtgcagttgttcaccctgcgcgccaaagccaaggacatcaaagccctggaa
aaagccctcgacgacaaccgcaaagcgctcaaggacggcgagttgcaacaggtgatcgac
tcagtgcaaggcttctacgacgtgctgctcgaaggctcgggcaaccatgtggcggcgact
caattgcgccagttgcaagcgcgcatcagctacttgcgcgcgacctcggtttcccaggaa
aaccgtcgcggcgcgagtaatcaggaaatggaaaaaatggtcgaagcgatcaagagcggc
gatccgctggtggcgcatcaggcctgtgttgatcacgttcgcgctgccgctgcggtagcg
ctcgactatctcaagcgcaagcaggaagagaccggcgcaaccccggccatgaccctgccc
atcgcgctgaaagaaccccgtataggtcactga
DBGET
integrated database retrieval system
