Pseudomonas germanica: J0G10_15145
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Entry
J0G10_15145 CDS
T08191
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00500
Starch and sucrose metabolism
pgf01100
Metabolic pathways
pgf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
J0G10_15145 (glgX)
Enzymes [BR:
pgf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
J0G10_15145 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
QYY79090
LinkDB
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Position
complement(3387589..3389748)
Genome browser
AA seq
719 aa
AA seq
DB search
MTRPKNAEPTAHAEPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCIFDDAGEVEL
ERIELPEYTDEIYHGYLPDAHPGLIYGYRVYGPYDPANGHRFNHNKLLIDPYAKQLVGQL
KWSEALFGYTIGHPDADLSFDERDSAPFVPKCKVIDPAHTWGNDHRVSVPWDKTIIYETH
VRGISMRHPSVPENVRGTFAGLMVDDVLEHIRKLGVSTVELLPIHAFVNDQHLLHKGMTN
YWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEANLEVILDVVYNHTAEGNEQGPTLSM
RGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWASEMHVDGFRFDL
ATILGRYHDGFDERHSFLVACRQDPVLRQVKMIAEPWDCGPGGYQVGNFPPGWVEWNDKF
RDTVRAFWKGDDGQVADFASRMTASGEMFNQRGRRPYSSVNFITAHDGFTLNDLVSYNDK
HNEANDENNQDGSNNNLSWNHGVEGPTDDPEINALRHRQMRNFFATLLLAQGTPMIVAGD
EFARTQDGNNNAYCQDSEIGWVNWDLSEDGKALLKFVKRLIKLRLAYPILRRGRFLVGEY
NEDIGVKDITWLAPDATEMTTEHWHDAHNRCLGMLLDGRAQETGIRRKGADATLLLVVNA
HHDIVNFTLPEVPEGSFWTCMIDTNQPSIRGQERFDFGHEYSVTGRSLLLFELQRDEED
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtccaaagaatgccgagcccaccgcgcacgccgagccgtcgagaatccgtgaa
ggcctgcccttcccgctcggtgcgacctgggatggtctgggggtgaactttgctctgttt
tccgccaacgccaccaaggtcgaactgtgcatcttcgacgatgccggcgaagttgaactc
gaacgcatcgaactgccggaatacaccgacgagatctaccacggctacctgcctgatgcg
cacccggggctgatctacggttaccgcgtctacggcccgtatgacccggccaacggccac
cgcttcaaccacaacaaattgctcatcgacccgtacgccaaacaattggtcggccaactg
aaatggtcggaagcgttgttcggctacaccatcggccaccccgacgccgacctcagtttc
gatgaacgtgacagcgcgcccttcgtgcccaaatgtaaagtcatcgacccggcgcacacc
tggggcaacgaccaccgcgtcagcgtgccgtgggacaaaaccatcatttatgaaacccac
gtgcgcggcatcagcatgcgtcacccttcggtaccggagaacgtacgcggcacctttgcc
gggctgatggtcgacgacgtgctcgaacacattcgcaagctcggcgtgtctaccgtcgaa
ttgctgccgattcatgccttcgtcaatgaccagcatctgctgcataaaggcatgaccaat
tactggggttacaacagcatcgcgttcttcgccccggacccgcgctacctggccagcggc
aagattgccgaattcaaggagatggtcgcgcacctgcacgaagccaacctcgaagtgatc
ctcgacgtggtctataaccacaccgccgagggcaacgagcaaggcccgaccctgtcgatg
cgcggcatcgacaacgcctcgtactatcgcttgatgcccgacgacaagcgctactacatc
aatgattccggcaccggcaacaccctcgacctgagccacccgtgcgtgctgcaaatggtc
accgactcgctgcgttactgggccagcgagatgcacgtcgacggtttccgtttcgacctg
gcgacgattctcggccgctaccacgacggtttcgacgagcgtcacagcttcctcgttgct
tgccgtcaggacccggtgctgcgtcaggtgaagatgatcgccgagccatgggactgtggc
cccggtggttatcaggtcggcaacttcccgccgggctgggtcgagtggaacgacaagttc
cgcgacaccgtgcgcgcgttctggaaaggcgacgacggccaggttgccgatttcgccagc
cgcatgactgcctccggtgagatgttcaaccagcgcgggcggcggccgtactcctcggtg
aacttcatcaccgcccacgacggtttcactctcaacgacctggtctcgtacaacgacaag
cacaacgaagccaacgacgaaaacaatcaggacggcagcaacaacaacctgtcgtggaac
cacggcgtcgaaggcccgaccgacgatcccgaaatcaatgccctgcgccatcggcagatg
cgcaatttcttcgccaccctgctgctcgcccaaggcacgccgatgatcgtcgccggtgat
gagttcgcccgtacccaggacggcaacaacaacgcctattgccaggacagcgagatcggt
tgggtcaactgggacctgagcgaggacggcaaggcattgctgaaattcgtcaagcgcctg
atcaagctgcgcctggcttatccgatcctgcgtcgcggccgcttcctggttggcgaatac
aacgaggacatcggcgtcaaggacatcacctggctggcgccggatgccaccgagatgacc
accgagcattggcacgatgcgcacaaccgctgcctgggcatgttgctcgacggccgcgcg
caggaaaccgggattcgccgcaagggtgcggatgcgacgctgctgctggtggtcaacgcc
catcatgacatcgtcaacttcaccctgccggaagtaccggaaggcagtttctggacctgc
atgatcgacaccaatcagccgtcgatccgtggtcaggaacgcttcgatttcggccacgaa
tactcggtcaccgggcgctcgctgctgctgttcgaactgcaacgtgatgaagaagactga
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