Pseudomonas germanica: J0G10_16050
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Entry
J0G10_16050 CDS
T08191
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgf03000
]
J0G10_16050
Transcription factors [BR:
pgf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
J0G10_16050
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QYY79262
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Position
3588275..3589510
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AA seq
411 aa
AA seq
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MENPELPNLMHVRAFVRVADHGSVSKASVALYRAQSVVTRSISEFEARLGVTLFERHANG
MRLTNFGERLLPRARRVLAELGSVPTLLGLGEKAAIEPLYLFQARRLQVFIKLCETHHMQ
TVASLLGLSQPAVSSTLKVLENGCGQSLFERTPRGLQPTRASHDILFAIRRALNELRHID
TDITALHGALHGVVHVGALPLGRTRILPEAIVRLMAEHPGIQVITNESPFDLLATELRAG
DVDFILGALRSSTYASDLVGESLLTEEMVVLARRDHPLCGNGDLQNHLGNARWVLPRAGS
PARTMLEECFAGFGIPAPSPVVESADMAIIRGLLLRSDMLAAVSAHQLEQEIASGELCIL
PLELKQTARAIGLTYRSGCLHSPVAQALMEMIRRVIRTQANEAVKAGSTDS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccccgaactgccaaatctgatgcacgtgcgtgccttcgtccgcgtagctgat
cacggcagcgtctccaaggcatcagtcgcgctgtaccgagcgcaatcagtggtcacccgc
tccatatcggaatttgaagcccgcctgggcgtgacgctgttcgagcgccacgccaacggt
atgcgcctgaccaatttcggagagcgtttgctgccccgagcgcgacgggtgctggcggag
cttgggagcgtgccgacattgctcggcctaggtgaaaaagccgcgattgaaccgctttat
ctgttccaggcgcgacgcctgcaagtgttcatcaaactctgtgaaacccaccatatgcag
accgtggccagtctgctgggcctgagccaaccggccgtcagttcgacgctgaaagtgctg
gaaaacggctgcggccaatcgctgttcgagcgcacgccacgcggcttgcagccgacccgc
gccagtcatgacatcctgtttgcaatccgccgtgcgctgaacgagttgcgccatatcgac
accgacatcaccgcccttcacggcgccttgcacggtgttgtacacgtcggtgccctgccc
ctcggccgcacgcgtatcctgcccgaggccatcgtgcgcctgatggcagagcatcccggc
attcaagtgatcaccaatgaaagtcccttcgacctgctggcgaccgagttgcgtgccggc
gatgtggatttcattttgggtgcgctgcgttcatcgacctatgccagcgacctggtcggc
gagtcactgctgacggaagaaatggtcgtgcttgcgcggcgtgatcatccgctctgcggc
aacggcgatttgcagaatcatctgggcaacgcgcgctgggtattgcctcgcgccggctca
ccggcgcggacgatgctcgaggaatgcttcgccggtttcggcattccggcgccttccccg
gtggtggaaagcgccgacatggcgatcattcgcggactgttgttacgctcggacatgctc
gcagccgtttcagcccatcaactggaacaggagatcgcgtccggcgagttgtgcattttg
ccgctggaattgaaacagactgccagagccattggcctgacctaccgcagcggctgcctg
cactcaccggtggcgcaggcgttgatggaaatgatccgccgggtgatccgaactcaggcc
aatgaagcggttaaagcaggctcaacggatagctga
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