Pseudomonas germanica: J0G10_16075
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Entry
J0G10_16075 CDS
T08191
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgf
Pseudomonas germanica
Pathway
pgf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J0G10_16075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgf03021
]
J0G10_16075
Transcription machinery [BR:
pgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J0G10_16075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_11
PhyR_sigma-like
HTH_20
HTH_31
HTH_28
HTH_DeoR
HTH_40
HTH_38
HTH_IclR
HTH_29
HTH_7
DUF6362
HTH_24
GerE
HVO_A0261_N
HTH_10
HTH_3
SpoIIID
TetR_N
HTH_22
Motif
Other DBs
NCBI-ProteinID:
QYY79267
UniProt:
A0ABX8YI62
LinkDB
All DBs
Position
3594482..3594997
Genome browser
AA seq
171 aa
AA seq
DB search
MRSDETLGTADLGLLYRTHHSWLHGWLIRRIGCRDNAADLAQDTFVRLLKSRQTSPLREP
RAYLSSIARGLMIDQYRRRELERAYLESVTLLPQHEVPSEESRLLILDALERIDRMLSML
KPRVRQAFLFARLDGLTCAQIAEKLGVSRATIERDLATALQHCYRLRYVEA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgatgaaacgctaggtactgcagatctagggctgctctatcgcacccaccac
tcgtggttacacggctggctgatccgacgcattggatgtcgcgataacgcagcagatttg
gcgcaggacaccttcgtacgtctgctcaaatcccgtcagaccagccccttgcgcgaacca
cgtgcctatttgagcagtatcgcccgcggactgatgattgatcagtatcgtcgtcgcgaa
ctcgaacgtgcctacctggaaagcgtcacgttgctgcctcaacacgaggttccctcggaa
gaaagccggctgctgattcttgatgcgctggagcgcatagaccgcatgctcagcatgctt
aaaccaagggttcgtcaggcgtttttattcgcccgactcgacggtctgacatgcgcgcaa
atagccgaaaagctcggtgtttcccgggcgacgattgagcgcgacctggccacggccctg
caacactgctatcgcttgcgttatgtcgaggcctga
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