Pseudomonas germanica: J0G10_16385
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Entry
J0G10_16385 CDS
T08191
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pgf03012
]
J0G10_16385 (selB)
Translation factors [BR:
pgf03012
]
Eukaryotic type
Elongation factors
J0G10_16385 (selB)
Prokaryotic type
J0G10_16385 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
WHD_2nd_SelB
WHD_2nd_SelB_bact
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
Motif
Other DBs
NCBI-ProteinID:
QYY84819
UniProt:
A0ABX8YXU8
LinkDB
All DBs
Position
complement(3659518..3661434)
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AA seq
638 aa
AA seq
DB search
MIVGTAGHIDHGKTSLLQALTGQTGDRRPQERARGMTIDLGYLYAELEPGAGLTGFIDVP
GHEKFTHNMLAGAQGIDLVLLVIAADDGVMPQTREHLAIVELLGIPRAVVAISKCDRVEA
GRVEEVQRQVLDLLEAGPFAEAPIVLVSSVTGHGVDELRETLLQTQREVLERSREGGFRL
AIDRAFSVAGAGIVVTGTALSGTVAVGDKLTLGPSGKSVRVRGLHAQNQPAELAVAGQRV
ALNLTGERLELAQIHRGQWLLSEWLHAPTQRVDFDFKLLPGDRTFEHFHPVHVHLGTQDV
IARVALLEGPRLSPGERMFAQLLINAPVHAVKGDRLILRDQSAQRTLGGGQVLDPFAPAR
QRRSPERLEQLRTLASGGELEHVLPVLLNYSAGGLDPQRLERQFNRPRASWSLAKNVRLI
DTRQGPVLFNVQRWAQLKFTLLEQLTQFHEQEPDQMGPDRDRLRRFSGLMLERPTFVSLL
DELLAAGSIQASGPWLHLPDHQVRLNAEDESLWQALQPLFENAGFDPPWVRDIAKMLGQD
DAVVRLLLRKLARLGLMHQVVRDLFLSDAQLRQMADVLLKLAKENPQIQVTTFRDALGLG
RKRCIQYLEYFDRVGLTRRLGESRQIRPDNALANACAQ
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcggcacggcagggcacatcgaccacggcaagacttcgctgttacaagcgctg
accggacaaaccggcgaccgccgcccgcaggaacgtgcacgcggcatgaccatcgacctc
ggttatctctacgctgaactggaacccggcgcggggctgaccgggtttatcgacgtgccc
ggtcacgagaaattcacccacaacatgctcgccggtgcgcagggcatcgatctggtcttg
ctggtgatcgccgcagacgatggcgtgatgccgcagacccgcgagcatctggcaattgtc
gaattgctcggcatcccgcgcgccgtggtggcgatcagcaaatgcgaccgggtcgaggcg
ggcagggtggaggaggttcagcggcaggtgctggatttgcttgaggccgggccgtttgcc
gaagcgccgatcgtgcttgtgtcgagcgtgaccgggcacggcgttgatgaactgcgcgag
acgttattgcagacgcaacgtgaagtactggagcgcagccgcgaaggtggttttcgcctg
gccatcgaccgcgcgttcagcgtcgccggtgcggggattgtggttaccgggacggcgttg
tcgggcacagttgccgtcggcgacaagctcaccctcgggccatccggaaaatcggtcagg
gttcgcggcttgcatgcacagaatcaacccgccgaacttgctgttgccggccagcgggtg
gcgttgaacctgaccggcgaacgcctcgaacttgcgcagatccatcgcggccagtggctg
ctcagcgaatggctgcacgcgccaacacaacgggtcgacttcgactttaaactgctgccc
ggcgatcgcacgttcgaacactttcacccggtacatgtgcacctcggtacgcaggacgtc
atcgctagggtggctttacttgaaggcccgcggctgagtcccggcgagcgcatgttcgcg
caactgctgatcaatgcgccggtgcatgcggtgaagggcgatcgcctgatcctgcgcgac
cagagcgcgcaacgcaccttgggtggcggtcaggtcctcgacccgttcgccccggcgcga
caacggcgcagccctgaacgtctggagcaactacgcaccttggcctccggcggcgaactc
gaacacgtcttgcccgtgctgctcaactacagcgccggcggcctcgatccgcaaaggctg
gagcgccagttcaatcgcccgcgcgcgtcgtggtcgttagcgaaaaacgtccgcctgatc
gacacccgccaaggcccggtgctgttcaacgtgcaacgctgggcgcagttgaaattcacc
ctgctggaacaactcacacagtttcatgaacaggagcccgaccagatgggccccgaccgc
gatcgcctgcgccgcttcagtggtctgatgctggagcgtccgacgttcgtgagtttgctg
gatgaattgctggcggccggctcgattcaggcgagcggcccatggctgcatttgccggat
catcaggtgcgcctgaatgccgaggatgaaagtctctggcaggcattacagccgctgttc
gaaaacgctggatttgacccgccgtgggtacgcgacatcgcgaaaatgctcggtcaggac
gatgccgtcgtacgcctgctgctacgcaaactggcgcgtttgggtttgatgcatcaagtc
gtacgcgatctgtttttgagtgacgcgcaactgcgtcaaatggccgacgtgttgttaaaa
ctggccaaggaaaatccgcagatccaggtgacaaccttccgcgatgcgctaggcttggga
cgcaaacgctgtattcagtacctcgaatatttcgaccgcgtcggcctgacccgacgcctc
ggcgaatcccgccagatccgccccgacaacgcgctggccaacgcctgcgcacaatga
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