Pseudomonas germanica: J0G10_17075
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Entry
J0G10_17075 CDS
T08191
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgf03032
]
J0G10_17075
03400 DNA repair and recombination proteins [BR:
pgf03400
]
J0G10_17075
Enzymes [BR:
pgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J0G10_17075
DNA replication proteins [BR:
pgf03032
]
Prokaryotic type
DNA Topoisomerases
J0G10_17075
DNA repair and recombination proteins [BR:
pgf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J0G10_17075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QYY79456
LinkDB
All DBs
Position
3829654..3830691
Genome browser
AA seq
345 aa
AA seq
DB search
MPDTVLTADLPSDLHYVDDTQPGITRKKLRGKFSYFEPSGQRISDPDEIKRINALAVPPA
YTDVWICPDPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLE
ALLAAPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEVNGSAILFQ
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHTVSSSDVNAYLQTLTG
ADFTAKDYRTWAGSALALAVLRELQWESETEAKRHVVEMVKGVAKQLGNTPAVCRKCYIH
PAVVEKFMLGALAELPRPRVRKGLRAEEVALAMFLERMSEMTDAP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccgtgctgactgccgacctgccatccgacctgcattacgtcgacgacacc
cagcccggtatcacccgcaaaaagctgcgtggcaagttcagctatttcgagccgtcaggc
cagcgcatcagtgatccggatgaaatcaaacgcatcaatgcccttgccgtaccacccgcc
tataccgatgtgtggatctgcccggatccgcgcggtcatctgcaagccaccggccgtgat
gcccgtggccgcaagcaatatcgctatcacgcgcgctggcgcgaagtgcgcgatgccgac
aagtattcgcgcctgcgtgagttcggtctcgcgttgccgaaactgcgcaaacaactggag
gcgctattggccgcgcccggcttcagtcgtgacaaggtcatggccacggtgatcaccctg
ctcgacgccacattgatccgggtcggcaatacccaatacgcccgcgacaaccgctcctac
ggcctgaccaccctgcgcagccgacatgtcgaagtcaacggcagcgcgatcctgttccag
tttcgcggcaaaagcggcatcgaacaccagatcaccgtcaaggatcggcgtctggcacgc
atcatcaagcggtgcctggaaattcccgggcagaatctgtttcagtatctcgatgaaaac
ggtgagcgacacaccgtcagttcttccgacgtcaacgcctacctgcaaaccctgaccggt
gccgatttcaccgccaaggattaccgcacctgggccggcagtgccttggcgctggcggta
ttgcgcgagttgcaatgggagtccgagaccgaggccaagcggcatgtggtggagatggtc
aaaggcgtcgccaagcagttgggcaacaccccggcagtgtgccgaaaatgctacatccac
cccgccgtggtggagaaattcatgctcggcgccctcgctgaactgcctcgcccgcgcgtg
cgcaaaggcctgcgtgcggaggaagtggcgctggcgatgtttctcgagcgaatgagcgag
atgaccgacgcaccttga
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