Pseudomonas germanica: J0G10_17865
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Entry
J0G10_17865 CDS
T08191
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgf03400
]
J0G10_17865
Enzymes [BR:
pgf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
J0G10_17865
DNA repair and recombination proteins [BR:
pgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
J0G10_17865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QYY79603
LinkDB
All DBs
Position
4045640..4047178
Genome browser
AA seq
512 aa
AA seq
DB search
MNKTRRLCLVLGDQLSFDLASLAGLDSEHDRVLMVEVMEEATHVAHHPQKIALIFSAMRH
FAQALEKQGIQVHYVALDDPQNSGSVPGELKRWQTLLQASELHVTECGDWRLEQSLKACG
VPIHWHADGRFLCSRDEFRAWAAGKKQLRMEFFYREMRRKSRLLLNGDGTPVGGAWNFDA
ENRKALPKTVKAPYPAGFANDAITVEVLALVKHRFASHYGSLEDFNYPVTHADAQALWAY
FLDYALAGFGDYQDAMASDEPFLFHARISAALNIGLLDLRQLCADVESAYWSGSIALNAA
EGFIRQLIGWREYVRGVYWLHMPEYAEGNAFANQRPLPEFYWTAATKMNCMRQAIGQSLK
HAYAHHIQRLMVTGNFALLAGIAPKQICEWYLAIYMDAFDWVELPNTLGMVMHADGGYLG
SKPYCASGQYINRMSDYCRDCAYSVRETTADNACPFNALYWHFLMRHADLLRGNQRMAMM
YKNLDRMPPAKQQALWQRGQQLLDTLDNGDLL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacccgtcggctgtgcctggtattgggtgaccagttatcgtttgatctggcg
tcattggccggtctggatagcgaacacgaccgtgtgctgatggtcgaggttatggaagaa
gccacccatgtcgcccatcacccgcagaagatcgcgctgattttcagtgccatgcgtcac
tttgctcaggcgctggagaaacagggcatccaggtgcattacgtggccctcgacgacccg
cagaacagcggttcggtgcccggcgagctgaagcgctggcagactttgttgcaggccagc
gagttgcacgtgacggagtgcggagactggcgtctggagcaatcgctcaaagcatgtggt
gtgccgatccactggcacgcggatggccgcttcctgtgcagccgcgatgagtttcgcgct
tgggccgcaggcaaaaaacagttgcgcatggagttcttctaccgcgagatgcgccgcaaa
agtcgcctgttgctcaacggtgacggcacgccggtcggcggcgcgtggaactttgacgcc
gagaatcgcaaagctttgccgaaaaccgtcaaggcaccctacccggccggttttgccaac
gatgcaatcaccgtcgaagtcctcgccttggtaaaacaccgtttcgccagtcattacggc
agtctggaggacttcaactatccggtgacgcacgccgatgcccaggcgctctgggcgtac
tttctcgactacgccctggccggcttcggcgactatcaggacgccatggccagcgacgag
ccgtttctgttccatgcgcgcatcagcgcggcgctgaacattggcctgctcgacctgcgc
cagctctgcgctgatgtggagtcggcctattggtccggcagcatcgcgctgaatgctgcc
gaaggtttcatccgccaactgatcggctggcgcgaatatgtccgaggcgtttactggctg
cacatgcccgagtacgccgaaggcaatgcatttgccaaccagcggccattgccggagttc
tactggaccgctgcaaccaaaatgaattgcatgcgccaggccatcggccaaagcctcaaa
cacgcctacgcccatcacatccagcgcctgatggtcactggcaatttcgccctgctcgcc
ggcatcgcgccgaagcagatctgtgaatggtatctggcgatttacatggacgcgttcgat
tgggtcgaactgcctaacaccctcggcatggtcatgcacgccgatggcggttacctcggt
tccaagccttattgcgccagcggccagtacatcaaccggatgtccgactactgtcgcgac
tgtgcttactcggtgcgcgaaaccacggccgacaacgcctgcccgttcaacgccctgtac
tggcatttcctgatgcgccacgccgaccttctacggggcaatcagcgcatggcgatgatg
tacaaaaacctcgaccgcatgccgccagccaaacaacaggcactgtggcaacgcggccaa
cagttgctcgacacgctggataacggcgacttgttatga
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