Pseudomonas germanica: J0G10_18065
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Entry
J0G10_18065 CDS
T08191
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00330
Arginine and proline metabolism
pgf01100
Metabolic pathways
pgf01110
Biosynthesis of secondary metabolites
Module
pgf_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
J0G10_18065
Enzymes [BR:
pgf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
J0G10_18065
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QYY79640
LinkDB
All DBs
Position
complement(4127150..4129405)
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AA seq
751 aa
AA seq
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MYKDLKFPVLIVHRDIKADTVAGDRIRGIAQELEQEGFSIVSATDYAEGRLVASTHHGLA
CMLIAAEDASTNSHLLQNMAELIGLARVRAPDLPIFALGEQVTLENAPADAMAELNQLRG
ILYLFEDTVPFLARQVARAARKYLDGLLPPFFKALVQHTADSNYSWHTPGHGGGVAYHKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHSMVARDDLVLVDRNCHKSVLHAIIMTGAIPLYLCPERNELGIIGPIPLSEFS
RESIQAKIDASPLTKGRAPKVKLAVVTNSTYDGLCYNAELIKQSLGNSVEVLHFDEAWYA
YAAFHEFFAGRYGMATSRSEDSPLVFTTHSTHKLLAAFSQASMIHVQDGGARQLDRDRFN
EAFMMHISTSPQYSIIASLDVASAMMEGPAGRSLLQETFDEALSFRRALANLRQHIAADD
WWFSIWQPPGVEGIDRVQTEDWLLQPDAEWHGFGEVSDDYVLLDPIKVTLVMPGLNAGGA
LSEKGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDAN
VRLDTCLPCVAQQDTVRYRGMGLRDLCDQLHACYRSNATAKHLKRMYTVLPEIAMKPAHA
YDHLVRGEVEAVPIDDLEGRIAAVMLVPYPPGIPLIMPGERFTESTRSIIDYLKFARTFD
SSFPGFVADVHGLQHEDEGNGRQYTVDCVKE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaagatttgaagtttccggtgttgatcgttcatcgcgacatcaaggccgacacg
gtcgccggtgaccgtatccgtggcatcgcccaagagttggagcaggaaggtttcagtatc
gtgtcggccaccgactacgccgaagggcggttggtcgcgtcgacccatcatggtctggcg
tgcatgctgattgccgccgaggacgccagtacgaactcgcatcttttacagaacatggcc
gaattgatcgggctggcgcgggtgcgtgcaccggatctgccgatctttgccctgggcgag
caagtcaccctggaaaatgcgccggccgatgccatggccgagctcaatcaactgcgcggc
attctctatctgttcgaagacaccgtaccgttcctcgcccggcaagtggcccgcgcggcg
cgcaagtacctcgatggcttgttgccaccgtttttcaaggcgctggtgcagcacaccgcc
gactccaattattcctggcacacccctggccatggcggcggtgtggcgtatcacaagagt
ccggtcgggcaggcgtttcaccagttcttcggtgaaaataccctgcgttcggatttgtcg
gtgtcggtgccggagctcggttcgctgctcgatcacaccgggccgctcgccgaagccgaa
gcgcgcgccgcgcgcaatttcggcgccgatcacacctttttcgtgatcaatggcacctcg
accgccaacaagattgtctggcattcgatggtcgcgcgcgacgatctggtgctggtcgat
cgcaactgccacaagtctgttttgcacgcgatcattatgaccggggcgatcccgctgtac
ctgtgccctgagcgtaatgagctggggatcatcggcccgatcccgctgagcgaattcagc
cgcgagtcgattcaggccaagatcgacgccagcccgctgaccaagggccgcgcgccgaaa
gtcaaactcgccgtggtcaccaattcgacttacgacggcctctgttacaacgccgagctg
atcaagcaaagtctcggcaacagcgtcgaggtgctgcatttcgacgaggcctggtacgcc
tatgcggcgtttcacgaattcttcgccgggcgctacggcatggccacctcgcgcagcgaa
gacagcccgctggtattcaccacgcattccacgcacaagctgctcgctgccttcagtcag
gcctcgatgattcatgtgcaggacggcggtgcgcggcaactggaccgtgaccgtttcaat
gaagcgttcatgatgcacatctcgacttcgccgcagtacagcatcatcgcctcgctcgac
gttgcctcggcaatgatggaaggcccggccgggcgttcgctgttgcaggagacctttgac
gaagcgctgagcttccgtcgcgcgctggccaatctgcggcagcacatcgccgccgatgac
tggtggttttcgatctggcagccgccgggtgtcgagggcatcgaccgcgtgcagactgaa
gactggttattgcagccggatgccgagtggcatggttttggggaggtcagcgacgattac
gtgttgctcgacccgatcaaagtcacgctggtcatgccggggttgaacgccggcggcgcg
ctgagcgagaagggcatcccggcggcggtggtcagtaaattcctctgggagcgggggctg
gtggtggagaagacgggtctgtattcatttctggtgctgttctccatgggcattaccaaa
ggcaaatggagcacgctgctcaccgagttgctggaattcaaacgcagctacgacgccaat
gtgcgcctcgacacctgcctgccgtgtgttgcccagcaagacaccgtgcgttatcgcggc
atgggcctgcgggatttgtgtgatcaactgcacgcctgttatcgcagcaatgccacggcc
aaacacctcaaacgcatgtacaccgtgttgccggaaattgccatgaaaccggcgcacgct
tacgatcatctggtgcgcggcgaagtcgaggcggtgccgatcgatgatctggaaggacgc
atcgccgcggtgatgctggtgccgtatccgccggggattccgctgatcatgcccggcgaa
cgctttaccgagtcgacacgctcgatcatcgattacttgaaatttgctcgcacgttcgat
agcagcttccccggttttgtcgcggatgtgcatggattgcagcacgaagatgaaggcaat
gggcggcaatacaccgtcgattgcgtcaaggaatga
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