Pseudomonas germanica: J0G10_18250
Help
Entry
J0G10_18250 CDS
T08191
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgf01002
]
J0G10_18250
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgf01011
]
J0G10_18250
Peptidases and inhibitors [BR:
pgf01002
]
Cysteine peptidases
Family C82
J0G10_18250
Peptidoglycan biosynthesis and degradation proteins [BR:
pgf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
J0G10_18250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QYY79675
LinkDB
All DBs
Position
complement(4164575..4166191)
Genome browser
AA seq
538 aa
AA seq
DB search
MFKKYACYLSICLLAAPFVACADEPLPPLETLPTPPAEMPVEPQSPLQAVMINLPQSCPA
IAAHLNGPALTQLQAFYQQQDWMPVWASESARLPMLQAQLQLLADDGLNPKRYPIATTAP
QDGELCADIDISRNYLQALQDLHYGSLLQSHFEPLWHADATPRDRQAELLAIAVPGMHDI
PAAFELARPRLAQYQDLRQLYAAQRLKALPQWQAVGSGPLLRPAMEDKRVPELAQRLYNE
GYLTQVVGTPGNAYDGVLVDAVKSFQANHSLQADGVVGPGTIAELNISPLTRREQLRVNL
ERFRWMAQDMEPDGLLVNVAAAELTLYQGGVPVWQTRTQVGRAERQTPLLKSRVTRLTLN
PTWTVPPTIWKEDKLPEIRKDQTFLSRQNLQVLDANGQPLAAADIDWDNPGNIMLRQDAG
PRNPLGQMVIRFPNPFSVYLHDTPSKALFEKGPRAFSSGCVRVEHPMQLRDLLLTPAEKA
RTETLLATGTTHEFRLSAPVPILMTYWTAQVDSSGRVRYSPDIYSRDSALLVGLDRAH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaagtacgcatgctacttgagcatttgtttgctcgctgcgccgtttgtcgct
tgtgccgatgagccgctgccgccgctggaaacactgccgacgccaccggcagaaatgccg
gtcgagccgcaaagtccgttgcaggctgtaatgatcaatctgccgcagtcgtgcccggcg
attgccgcgcatctcaacggcccggcgctgacgcaattgcaggccttctatcagcagcag
gactggatgccggtgtgggcgagtgaatctgcgcgattgccgatgttgcaggcgcaatta
cagttgttggccgatgatggcctcaatccaaaacgctatccgatcgcgaccacagcgccg
caggatggcgagttgtgtgccgacatcgacatcagccgcaactacctccaggccctgcag
gatctgcattacggaagcttgctgcaatcacacttcgaaccgctgtggcatgccgacgcc
accccacgcgaccgtcaggcggaattgttggccatcgcggtaccgggcatgcacgacatt
cccgccgcgttcgaactggcccgaccgcgcctggcgcaatatcaggacctgcgtcagctc
tacgctgcgcaacggctcaaagccttgccgcaatggcaggcggtgggcagcgggccgctg
ttgcgcccggccatggaagacaaacgcgtgccggaactggcccagcgtctttacaacgaa
ggttatctgactcaggtcgttggtacgcccggcaatgcttatgacggcgtgctggtcgac
gccgtgaagagttttcaggccaaccattcgctgcaggctgacggtgtagtcgggccgggc
acgattgccgaactcaacatcagtccgctgacccgtcgcgagcagttgcgggtcaacctc
gaacgtttccgctggatggctcaggacatggagcccgatggcttgctggtcaacgtcgcc
gccgcggaactgacgctgtatcagggcggcgtaccggtgtggcagacgcgcactcaggtg
ggccgagccgaacgccagacgccgctgctgaaatcgcgggtgacacgcctgaccctgaac
ccgacctggaccgtgccgccgaccatctggaaagaagacaagctgccggaaatccgcaag
gaccagaccttcctcagccggcagaacctgcaagtgctcgacgccaacgggcagccgctg
gcggcggcggacatcgattgggacaaccccggcaacatcatgctgcgtcaggacgccggg
ccgcgtaatccgttggggcaaatggtcatccgcttccccaacccgttctcggtgtacctg
cacgacacgccaagcaaggcgctgttcgaaaaaggaccacgcgctttcagctccggttgc
gtgcgggtcgaacacccaatgcaactgcgtgatctgctgctcaccccggcggaaaaggcc
cgcaccgaaaccttgctggccaccggcaccactcacgaatttcgcttgtcggcaccggtg
ccgatcctgatgacctactggacggcccaggtcgacagcagcggccgcgtgcgctactca
ccggacatctacagtcgcgatagcgcgttgctggtggggcttgatcgagcgcactga
DBGET
integrated database retrieval system
