Pseudomonas germanica: J0G10_19165
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Entry
J0G10_19165 CDS
T08191
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00020
Citrate cycle (TCA cycle)
pgf00480
Glutathione metabolism
pgf00720
Other carbon fixation pathways
pgf01100
Metabolic pathways
pgf01110
Biosynthesis of secondary metabolites
pgf01120
Microbial metabolism in diverse environments
pgf01200
Carbon metabolism
pgf01210
2-Oxocarboxylic acid metabolism
pgf01230
Biosynthesis of amino acids
pgf04146
Peroxisome
Module
pgf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgf_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J0G10_19165
09102 Energy metabolism
00720 Other carbon fixation pathways
J0G10_19165
09106 Metabolism of other amino acids
00480 Glutathione metabolism
J0G10_19165
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
J0G10_19165
Enzymes [BR:
pgf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
J0G10_19165
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
DUF7270
Motif
Other DBs
NCBI-ProteinID:
QYY79856
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All DBs
Position
4349926..4352151
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AA seq
741 aa
AA seq
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MPTRSKIIYTFTDEAPALATYSLLPIIEAYTASADIAVETRDISLAARILASFPEQLGDK
AVADHLAELGDLAVTPEANIIKLPNISASVPQLQAAIKELQAQGYNLPDYPETVTSDADK
DAKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAKDSKSHVAHMSTGD
FYGSEKAALIDAADAVKIELIAKDGTATVLKEKTTVQAGEILDCAVMSKNALRAFIAAEI
ESAKAQGVLLSVHLKATMMKVSDPIMFGQIVAEFYKDALTKHTDVLAEIGFNLNNGIGDL
YARIKALPAEQQAQIEADMAAVYAARPSLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDTKAVIPDRCYATIYQAVIEDCKANGAFDPTTMGSVPNVGLMAKKAEEY
GSHDKTFQIKADGVVRVTDSKGNLLMEQAVEAGDIFRMCQTKDAPIQDWVKLAVNRARAS
STPAIFWLDPMRAHDGVVIEKVQAYLKDHDTTGLDIQIMAPVDAMKYTLQRTREGKDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLR
WDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSH
FYLAMYWAQALAAQTEDAALQAQFATLAKTLTENEATIVAELNAVQGKPVDIGGYYHANA
ELISKAMRPSATLNAAIAALV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgctcgaagatcatctataccttcaccgacgaagctccagccctcgccacc
tattccctgctgccgatcatcgaggcttacaccgcctcggccgatatcgccgtggaaacc
cgcgatatctctcttgcagcacgtattctggccagcttccccgagcaactgggcgacaaa
gccgtagccgaccacctcgccgaactgggcgacctggccgttacgcctgaagccaacatc
atcaagctgccgaacatcagcgcttcggtgccacagttgcaagccgcgatcaaagagctg
caagctcagggttacaacctcccggactacccggaaaccgtgaccagcgacgccgacaaa
gatgccaaggcacgttacgacaaggtcaagggcagcgccgtgaacccggttctgcgtgaa
ggtaactctgaccgtcgcgctccgctgtcggtgaagaactacgcgcgcaagcacccgcac
aaaatgggcgcctgggccaaagactccaaatcccacgtcgctcacatgagcaccggcgat
ttctacggcagcgaaaaagctgccctgatcgacgccgctgacgccgtgaagatcgagctg
atcgccaaagacggtaccgctaccgttctgaaagaaaaaaccaccgttcaggccggcgag
atcctcgactgcgccgtaatgagcaaaaacgccctgcgcgcgttcatcgctgctgaaatc
gaaagcgccaaggcccaaggcgtgctgctttcggttcacttgaaagcaaccatgatgaag
gtctccgacccgatcatgttcggccagatcgttgccgagttctataaagacgccctgacc
aagcacactgacgtgctggccgagatcggcttcaacctgaacaacggcatcggcgatctg
tacgcgcgcatcaaggccctgccggccgagcagcaagctcagatcgaagctgacatggcc
gcggtctacgctgctcgcccatcgctggcgatggtcaactccgacaaaggcatcaccaac
ctgcacgtgccgagcgacgttatcgttgacgcctcgatgccagcgatgatccgtgactcc
ggcaaaatgtggggcactgacggtcagctgcacgacaccaaggctgtgatcccggatcgt
tgctacgcgaccatctaccaggctgtgatcgaagattgcaaagccaatggcgctttcgac
ccgaccaccatgggcagcgtgccaaacgttggcctgatggcgaagaaagccgaagagtac
ggctcgcacgacaagactttccagatcaaggctgacggcgtggttcgcgtcaccgacagc
aagggcaacctgctgatggaacaggctgttgaagccggcgacatcttccgcatgtgccag
accaaagacgcgccgatccaggactgggtcaaactggccgtcaaccgcgctcgcgcgagc
agcactccagcgatcttctggctggacccgatgcgcgctcacgatggcgtagtgatcgag
aaagttcaggcttacctgaaggatcacgacactaccggcctggacatccagatcatggcg
ccggtcgacgccatgaagtacaccctgcagcgcacccgcgaaggcaaggacaccatttcg
gtgaccggcaacgtactgcgcgactacctgaccgacctgttcccgatcatggaactgggc
accagcgccaagatgctgtcgatcgtgccgctgatgaacggcggtggcctgttcgaaacc
ggcgccggcggttcggcaccgaagcacgtgcagcaactggttgaagagaacttcctgcgc
tgggattcgctgggtgaattccttgcactggcagcgtcccttgagcatttgggtgtgaac
tacaacaacccgaaagccctggtgctgtcgaaaaccctggatcaggccaccggccagttc
ctcgacaacaacaagtcgccatcgcgcaaagtcggcaacatcgacaaccgcggcagccac
ttctatctggcgatgtactgggctcaggccctggctgcccagactgaagacgctgcactg
caagcgcagttcgcgactctggccaagactctgaccgagaacgaagcaaccatcgttgcc
gagctcaacgccgttcagggcaagccagtcgacatcggcggttactaccacgccaatgcc
gagctgatcagcaaggccatgcgcccaagcgcaaccctcaacgcggcgattgctgcgctg
gtttaa
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