Pseudomonas germanica: J0G10_19480
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Entry
J0G10_19480 CDS
T08191
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0G10_19480 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgf03400
]
J0G10_19480 (xthA)
Enzymes [BR:
pgf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J0G10_19480 (xthA)
DNA repair and recombination proteins [BR:
pgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J0G10_19480 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QYY79917
UniProt:
A0ABX8YKF9
LinkDB
All DBs
Position
4432791..4433603
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AA seq
270 aa
AA seq
DB search
MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLEEVRALGYHVYFHGQK
GHYGVAMLSRKEPIAIHKGFATDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP
TKFPAKQRFYSDLQALLESQFHNEQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF
LPEEREWMARLKNWGLTDSYRHLNPDVTDMFSWFDYRSRGFEDEPKRGLRIDVILASHGL
LPRVKAAGVDYELRGMEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtttccttcaacatcaacggactgcgtgcccgtccgcatcagctggcagcg
ctgatcgaaaaacaccagccggacgtgatcggcctgcaggaaaccaaggtccacgacgac
cagttcccgctcgaagaagtccgcgccctcggctaccacgtgtatttccacggccagaaa
ggccattacggtgtggcgatgctctcgcgcaaggagccgatcgccatccacaaaggtttc
gccaccgacgaagaagacgctcagcgtcgctttatctggggcacgttcgccgacgccaat
ggcgtaccggtgaccatcatgaacggctatttccctcagggtgaaagccgcgaccaccca
accaaattccccgccaagcagcgtttctacagcgatctgcaagcgctactggaaagccag
ttccacaacgagcagccgctggtggtgatgggcgatgtgaatatttccccggaagactgc
gacatcggcatcggcccggacaacatgaagcgctggctgaaaaccggtaaatgcagcttc
ctgccggaagagcgcgagtggatggcacgcctgaaaaattggggtttaaccgacagctat
cgccacttgaacccggatgtgaccgacatgttcagttggttcgactaccgcagccgtgga
tttgaggatgagccgaagcgcgggctgcgcatcgatgtgattctggcgtcccatggtttg
ttgccgcgggtgaaggcagcaggtgtcgactatgaattgcgcgggatggaaaaaccgtcc
gatcatgcgccgatctggcttgaactcagctga
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