Pseudomonas germanica: J0G10_23945
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Entry
J0G10_23945 CDS
T08191
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgf
Pseudomonas germanica
Pathway
pgf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J0G10_23945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgf03021
]
J0G10_23945
Transcription machinery [BR:
pgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J0G10_23945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
Sigma70_ECF
GerE
HTH_28
HTH_24
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
QYY80742
UniProt:
A0ABX8YMR2
LinkDB
All DBs
Position
complement(5394922..5395449)
Genome browser
AA seq
175 aa
AA seq
DB search
MSGADLSHRHTVDGLFRAHYGWLCAYLRRHLHDAASSEDIAAETFAQLLEAPALRAIREP
RALLTTIAQRLLYQRWRRGDLERHHRQHIDVDYAASPEDLVTLSQTLNRIDHSLQRLPGK
VRATFLLARIDGLTYPQIATELGISQRSVSVYMSRSQALCDRHSANQFLQNKRSA
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgccgacctttcccatcgtcacaccgtggacggcctgtttcgcgcccactat
ggttggctctgtgcttatctgcgccgtcatctgcatgacgcggccagcagcgaagacatc
gccgccgaaaccttcgcccaattgctcgaagccccagcgctgagggccattcgtgaacct
cgcgccctgctgacgactatcgcccaacgcctgctttatcagcgctggcgacgcggtgat
ctggaacgtcaccatcgccagcacatcgatgtcgattacgccgcttcgcctgaagacctc
gtaacgctgtcgcaaaccctcaaccgcatcgatcacagcttgcagcgcttgcccggcaaa
gtccgcgcgacgtttctgctcgcccgcatcgacggcctgacctacccgcaaatcgccacc
gaactgggtatctcccagcgttcggtcagcgtgtacatgagccgttcccaagcgctgtgc
gatcgccacagcgccaaccaattcctgcaaaacaagaggtctgcatga
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