Pseudomonas germanica: J0G10_23990
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Entry
J0G10_23990 CDS
T08191
Symbol
fadD2
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00061
Fatty acid biosynthesis
pgf00071
Fatty acid degradation
pgf01100
Metabolic pathways
pgf01212
Fatty acid metabolism
pgf02024
Quorum sensing
pgf04146
Peroxisome
Module
pgf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
J0G10_23990 (fadD2)
00071 Fatty acid degradation
J0G10_23990 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
J0G10_23990 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
J0G10_23990 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pgf01004
]
J0G10_23990 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgf04147
]
J0G10_23990 (fadD2)
Enzymes [BR:
pgf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
J0G10_23990 (fadD2)
Lipid biosynthesis proteins [BR:
pgf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
J0G10_23990 (fadD2)
Exosome [BR:
pgf04147
]
Exosomal proteins
Exosomal proteins of breast milk
J0G10_23990 (fadD2)
Exosomal proteins of breast cancer cells
J0G10_23990 (fadD2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QYY80751
LinkDB
All DBs
Position
complement(5403108..5404796)
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AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIDMGEFKSVIEVFERSCKKFADRPAFSNMGITLTYAELERQSA
AFAGYLQAHTDLVPGDRIAVQMPNILHYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKD
SGARALVYLNMFGQKVQEVLADTDIQYLIEAKMGDLMPTAKGWLVNTVVSKVKKMVPAYS
LPQAISFKSALRMGRGLGIKPLKVSLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACLAQLGPDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIAGFI
KELKNWRFSALLGLNTLFVALMDHPDFKTLDFSSLKLTNSGGTALVKATAERWEQMTGCR
ITEGYGLTETSPVACTNPYGDQSRLGTVGLPVPGTLLKVINDDGVEQPMGERGELCIKGP
QIMKGYWHKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARETGVSLEELKAYCKENFTAYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaacgacaagcgcccggccggcgtaccgctggacatcgacatg
ggtgagttcaagtcggtgatcgaggtgttcgagcgttcctgcaagaagttcgctgatcgc
ccggcgttcagcaatatggggatcaccctgacttacgctgaacttgagcggcagagcgcc
gccttcgccggttacctgcaggcgcataccgatctggttccgggcgatcgcatcgccgtg
cagatgcccaacatcctgcattacccgattgccgtgttcggtgcactgcgtgccgggctg
atcgtggtcaacaccaacccgctgtataccgcacgggagatgcgccaccagttcaaggat
tccggcgcgcgggcgctggtgtacctgaacatgttcggccagaaggtccaggaagtactg
gccgacaccgacatccaatacttgatcgaagccaaaatgggcgacctgatgcccaccgcc
aagggctggctggtcaacaccgtggtcagcaaagtgaagaaaatggtcccggcgtattcg
ctgccgcaggccatctccttcaaaagcgcactgcgcatgggccgaggtctgggcatcaag
ccgctgaaggtcagcctcgacgacatcgccgtgctgcaatacaccggtggcaccaccggg
ctggcgaaaggcgcgatgctcacccacggcaatctggtggcgaacatgcagcaagtgcgc
gcctgtctcgcgcaactcggcccggacgggcagccgctgctgcgcgaaggccaggaagtg
atgatcgcaccgctgccgctgtatcacatctatgccttcaccgcgaactgcatgtgcatg
atggtttccggcaaccacaacgtgctgatcaccaacccgcgcgacattgccggcttcatc
aaggagctgaagaactggcgcttctccgcgctattgggcctgaacaccttgttcgtggcg
ctgatggatcacccggatttcaagaccctcgatttctccagcctgaagctcaccaactca
ggcggcaccgcgctggtcaaagccaccgccgagcgttgggaacagatgaccggttgccgc
atcaccgagggttacggcctgaccgaaacctcgccagtggcctgcaccaacccgtacggc
gaccagtcgcggctgggcacggtcggcttgccggtgccgggcacgttgctcaaagtcatc
aacgatgacggtgtcgaacagccgatgggcgagcgcggcgagttgtgcatcaagggcccg
cagatcatgaaaggttattggcacaagcctgaggccactgccgaagtgctggatgccgag
ggctggttcaagtccggtgacattgcggtgatcgatccggacggtttcgtgcgcatcgtc
gatcgcaagaaggacatgatcatcgtctctggtttcaacgtttatccgaacgagatcgaa
gacgtagtgatggcgcacccgaaggtcgccaattgcgcggtgatcggcgtgccggacgag
cgttccggggaggcggtgaagctgtttgtggtggcgcgggaaaccggggtcagtctcgaa
gaactcaaggcttactgcaaagagaatttcactgcgtataaggtgccgaaacacatcgtg
ttgcgtgagtcattgccgatgacgcctgtcgggaaaattctgcggcgcgagttgcgcgat
atcgcgtaa
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