Pseudomonas germanica: J0G10_24380
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Entry
J0G10_24380 CDS
T08191
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgf03400
]
J0G10_24380
DNA repair and recombination proteins [BR:
pgf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
J0G10_24380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_16
ResIII
FtsK_SpoIIIE
AAA_10
AAA_30
T2SSE
TrwB_AAD_bind
CbiA
AAA_19
AAA_7
AAA_6
Hydrolase
SRP54
Lactamase_B_4
nSTAND3
Zot
Motif
Other DBs
NCBI-ProteinID:
QYY80823
LinkDB
All DBs
Position
complement(5488993..5490480)
Genome browser
AA seq
495 aa
AA seq
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MPDSSQLVIGADLAGQQIAQAMRLANRHGLVAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKVAERIAGMPWLKHKPQAYPVTLWDIHGESGHPLRTTLSEMGP
LLIGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPQLLGEDAALMTT
GSSQALLRRLAILEQQGAEALFGEPALQLEDILQPTADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFGDTPKALQERLEQVVRLIRSKGVG
VYFVTQSPADLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDSLSVLTEL
GIGEALVGTLTEKGTPEMVQRGLVAPPQSRIGPLTETERTLLIAGSPFKGRYDKPIDRES
AYEILMGRKGLAPEAEVPAGKPADEEPSLADRAGEFLGTAAGQALKSAMRQAANNLGKQL
VRGLMGSLLGGSKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcctcgcaactcgtaatcggcgctgatctcgcaggccaacagatcgctcag
gccatgcgcctggccaaccgccacggactggtcgcgggcgccaccggtaccggtaaaacc
gtcactttgcagcgtttggccgaggcgtttagcgacgccggggtcgcggtatttgccgcc
gacatcaagggtgatctgtgtggcctcggtgcggcgggcaatccgcagggcaaggtggcc
gagcgcattgccgggatgccgtggctcaagcacaagccgcaggcctatccggtgaccttg
tgggacatccacggcgagtccggtcatccgttgcgcaccacgttgagcgaaatgggcccg
ttgctgatcggcagcttgctggaactgaccgacagtcagcagtcggcgctatatgcagcc
ttcaaggtcgccgatcgcgaaggcctgttgctgctggacttgaaggatctgaaagcgctg
ctcaatcacctcaaggacaatccgcagctgttgggtgaagacgcggcgctgatgaccacc
ggttccagtcaggcgctgctacgccgtctggcgatccttgagcagcagggcgccgaagcc
ttgttcggcgaaccggcactgcaacttgaagacattctgcaaccgaccgccgatggtcgc
gggcgcattcatttgctcgatgccagccgtctggtgcacgaggcgccgaaggtctacgcg
acgttcctgttgtggttgctggccgagttgttcgagcagttgccggagcgcggcgatgcc
gacaaaccgctgctggcgctgtttttcgatgaggcgcatttgctctttggcgacacaccc
aaggcactgcaggagcggctcgaacaagtggtgcgcttgatccgttccaaaggggttggc
gtgtatttcgtcacgcagtcgccggcggacttgcccgatgacgtgctggcgcagctcggc
ctgcgcattcagcatggcttgcgcgcctttaccgccaaagagcagaaatccctgcgcgcg
gtggcggacggcttccggccgaatccggcgtttgacagtttgtcggtgctgaccgagttg
gggattggcgaagcgttggtcggcacgctgaccgagaaaggcacgccggaaatggttcag
cgcgggctggtggcgccaccgcagtcgcgaatcgggccgctgacggaaaccgagcgcacg
ctgttgattgcgggttcgccgttcaaggggcgctatgacaagccgatcgatcgtgagtcg
gcgtatgaaattctgatggggcgtaaagggctggcgccggaggccgaggtgccagcgggt
aagccagcagatgaagagccgagcctggccgacagggcaggggagtttctcgggacggca
gccgggcaggcgcttaagtcggcgatgcgccaggcagccaataacctcggtaagcaattg
gtgcgcggcttgatgggctctttactcggtggcagcaaacgccgctga
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