Pseudomonas germanica: J0G10_26345
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Entry
J0G10_26345 CDS
T08191
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0G10_26345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgf03019
]
J0G10_26345
Enzymes [BR:
pgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
J0G10_26345
Messenger RNA biogenesis [BR:
pgf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J0G10_26345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QYY81191
LinkDB
All DBs
Position
5947688..5949088
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AA seq
466 aa
AA seq
DB search
MLKKLFQSFRTPVRRTQHIRSTPEVLNSGQHSLQKTQFSRYAVNIVERLQGAGYQAYLVG
GCVRDMLLGITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPVNEDDEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNHLIRLIGDPKQRYQEDPVRMLRAVRFAAKLNFGIEKHTVQPIRELAPMLREIPSA
RLFEEVLKLFLSGHGAITFEMLVDLQLFAPLFPASADALEHNPEYTHTLISEALTNTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQERGMPPIPAMQEGAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEETDGLGEWWTDYQD
ANDSERRDMIRDLSGKGDDASGAPRKRRRSGGSKRKRAGAPSATGE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgaactcccgtgcgtcgtacgcaacacatccgc
agcacccctgaagtgctcaacagcggtcaacattcgctgcagaaaacgcaattcagccgc
tatgcggtgaatattgtcgaacgcctgcaaggtgccggttaccaggcttatctggtcggc
ggttgcgtgcgtgacatgctgctgggcatcacgcccaaggatttcgacgtcgccaccagc
gccacccccgagcaagtccgtgccgaattccgcaatgcgcggatcattggccgtcgcttc
aaactggtgcacatccatttcggtcgcgaaatcatcgaagtcgcgaccttccgcgccaat
cacccggtcaacgaagacgacgaagacagcaaccagtcttcgcgtaacgagagcgggcgc
attctgcgcgacaacgtttacggcaccctggaagaagacgcgcaacgccgcgacttcacc
atcaacgccctgtattacgatccggtcagtgagcgcatcctcgattacgccaatggcgta
cacgacatccgcaatcacctgatccgtctgatcggtgatccgaagcagcgctaccaggaa
gacccggtgcgcatgctgcgcgccgtgcgttttgccgccaagctcaacttcggcatcgaa
aagcacaccgtgcaaccgatccgtgaattggcgccgatgctgcgcgagatcccgtcggca
cgcctgttcgaagaagtgctcaagctgttcctttcgggacacggcgcaatcaccttcgaa
atgctggtcgatctgcaactgttcgccccgctgttcccggccagtgccgatgcgctggaa
cacaacccggaatacacccacacactgatcagcgaagcgctgaccaacactgacctgcgc
atcaagcagaacaaaccggtgaccccggcgttcctgtttgccgcgctgctgtggcctgcc
ctgccggctcgcgtgttgcgcttgcaggaacgtggcatgccgccgatcccggcgatgcag
gaaggcgcccacgagctgatcgccgaacagtgccagcgcatcgcgattccgaaacgtttc
accatgccgatccgcgagatctgggacatgcaggagcgtctgccacgccgcagcggcaaa
cgtgccgacctgttgctggacaatccgcgtttccgcgccggttacgacttcctcctgctg
cgtgaaagcgcgggcgaagaaacggacggcctgggcgaatggtggactgattatcaggac
gccaacgacagcgaacgtcgcgacatgatccgcgacctcagcggcaagggcgatgacgct
agcggcgcgccacgtaaacgtcgccgcagcggcggctccaagcgcaaacgcgccggcgcc
ccgagcgctacaggcgaataa
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