Pseudomonas germanica: J0G10_26715
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Entry
J0G10_26715 CDS
T08191
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00260
Glycine, serine and threonine metabolism
pgf00460
Cyanoamino acid metabolism
pgf00630
Glyoxylate and dicarboxylate metabolism
pgf00670
One carbon pool by folate
pgf00680
Methane metabolism
pgf01100
Metabolic pathways
pgf01110
Biosynthesis of secondary metabolites
pgf01120
Microbial metabolism in diverse environments
pgf01200
Carbon metabolism
pgf01230
Biosynthesis of amino acids
pgf01240
Biosynthesis of cofactors
pgf04981
Folate transport and metabolism
Module
pgf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J0G10_26715
09102 Energy metabolism
00680 Methane metabolism
J0G10_26715
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J0G10_26715
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
J0G10_26715
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
J0G10_26715
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
J0G10_26715
Enzymes [BR:
pgf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
J0G10_26715
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QYY81260
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Position
6024759..6026012
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQEQVVLNAQAMAEV
FIERGFDVVSGGTKNHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKQTECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgacctttttgccgccatggag
caagaagctcagcgccaggaagaacacattgagctgatcgcttcggaaaactacaccagc
ccagcggtgatggaagctcaaggctcggtcctgaccaacaagtacgctgaaggctaccca
ggcaagcgttactacggtggttgcgagtacgttgacgttgttgagcaactggccatcgac
cgcgccaaggaactgttcggcgccgattacgccaacgttcagccgcacgccggttcgcaa
gccaacgccgctgtttacctggccctgctgcaaggtggcgacaccattctgggcatgagc
ctggcacacggtggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccgtacagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgt
ctggcggttgagcacaagccgaaaatgatcgtggccggtttctctgcctactcgcagatt
ctcgacttcccgcgtttccgcgccatcgctgacaaagtcggcgcttacctgttcgtcgac
atggctcacgtggccggtctggtcgccgctggcgtctacccgaacccggtgcctttcgct
gacgtcgtgaccaccaccacccacaagaccctgcgcggtccacgtggtggcctgatcctg
gctcgcgccaacgccgagatcgagaagaagctgaactccgcggtattcccgggcgcccag
ggtggcccgctggagcacgtgatcgccgctaaagcgatctgcttcaaggaagcgctgcag
cctgagttcaaggcctaccaggaacaagtggtgctgaacgcccaggccatggccgaagtg
ttcatcgagcgcggtttcgacgtagtttcgggcggtaccaagaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggtaaagacgccgacgccgctctgggcaaagcgttc
atcaccgtgaacaaaaactccgtgccaaacgatccacgatcgccgttcgttacttccggc
ctgcgcttcggtactccggctgtgaccactcgcggtttcaagcaaaccgagtgcaaagag
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagcggtgatcgacgcc
gttcgtgagaaagtcaaagccatctgcaagaaactgccggtatacggcgcttaa
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