Pseudomonas germanica: J0G10_26835
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Entry
J0G10_26835 CDS
T08191
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgf03016
]
J0G10_26835 (trmA)
Enzymes [BR:
pgf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
J0G10_26835 (trmA)
Transfer RNA biogenesis [BR:
pgf03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
J0G10_26835 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Methyltransf_11
Cons_hypoth95
Methyltransf_12
MTS
DREV
RrnaAD
Methyltransf_15
Ubie_methyltran
TRM5-TYW2_MTfase
PrmA
Motif
Other DBs
NCBI-ProteinID:
QYY81284
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All DBs
Position
6048431..6049510
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AA seq
359 aa
AA seq
DB search
MTFDSQAYAEQLEAKVTRLRDLLAPFDAPEPTVFDSPLQNFRLRAEFRLWREGGERHYAM
FSQDDKRTPILIEAFPIASLRINQLMPQLKAAWQASSALSHKLFQVEFLTTLSGDAMITL
CYHRPLDEHWHTAATKLAADLGVSIIGRSKGKREVLGLDYVVEKLDVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYEALGDRTDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLSENAVDNVTLVRLSAEELTEALNEVRPFRRLQGIDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPETLAANIAQLHDTHRITQCALFDQFPWTHHMESGVLLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgattcccaggcttacgccgagcaacttgaagccaaggtcacgcgtttgcgt
gatctgctggcgccgttcgatgcccccgagccgaccgtgttcgactcgccgctgcagaac
ttccgtctgcgcgccgaattccgcctgtggcgcgagggcggcgagcggcattacgcgatg
ttctcgcaggacgacaaacgcacgccgatcctgatcgaagcgttcccgattgccagcctg
cgcatcaaccagttgatgccgcaattaaaggctgcctggcaggccagttcggcgctgagc
cacaagctgtttcaagtggagtttctgaccacactgtctggcgatgcgatgatcaccctg
tgctatcaccgcccgctggacgaacactggcatacagcggcgacgaagttggcggcggat
ctcggcgtcagcattattggtcgctcgaagggtaaacgcgaagtgcttggcctcgattac
gtggtcgagaaactcgacgtcggcggtcgcaccttcagctatcgccagccggaaggcgcg
ttcacccagccgaacggcacggtgaaccagaagatgctcaactgggcgtacgaagcactc
ggtgaccgcactgacgacttgctggagctgtattgcggtaacggtaacttcaccctgccg
ctcgcgactcgcgtgcgcaaagtgctggctaccgaaatcagcaaaacctcggtcaacgcg
gcattgagcaacctcagcgaaaacgctgtggataacgtcactctggtgcgtttgtctgcc
gaagaactgaccgaagcgctcaacgaagtgcgcccgttccgtcgcctgcaaggcatcgac
ctgaagagctacgagttcggcagcgtcttcgtcgacccgccgcgcgccggcatggacccg
gacacctgcgagctgacccgacgtttcgacaacatcctgtacatctcctgcaacccggaa
accctggcggccaacatcgcccagttgcacgacacgcaccgtattacccagtgcgcgttg
tttgaccagttcccgtggacgcatcacatggaatcgggtgtgttgctgacccggcgttga
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