Pseudomonas germanica: J0G10_28420
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Entry
J0G10_28420 CDS
T08191
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00260
Glycine, serine and threonine metabolism
pgf00460
Cyanoamino acid metabolism
pgf00630
Glyoxylate and dicarboxylate metabolism
pgf00670
One carbon pool by folate
pgf00680
Methane metabolism
pgf01100
Metabolic pathways
pgf01110
Biosynthesis of secondary metabolites
pgf01120
Microbial metabolism in diverse environments
pgf01200
Carbon metabolism
pgf01230
Biosynthesis of amino acids
pgf01240
Biosynthesis of cofactors
pgf04981
Folate transport and metabolism
Module
pgf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J0G10_28420
09102 Energy metabolism
00680 Methane metabolism
J0G10_28420
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J0G10_28420
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
J0G10_28420
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
J0G10_28420
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
J0G10_28420
Enzymes [BR:
pgf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
J0G10_28420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QYY81582
LinkDB
All DBs
Position
complement(6386309..6387562)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALIQPGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVESKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCEVLAGWICDILDNLGDADVEANVAQQVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aaacgcgtgatgcaagcgcaaggcagcggcctgaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcacgtcgataaagttgaagcactggccatcgaa
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccacactccggttcatcg
gccaacagtgccgtgtacctggcgctgatccagccgggcgacaccatcctcggcatgagc
ctggcccacggcggtcacctgacccacggagccaaggtgtcgtcctcgggcaagctctac
aacgccgtgcagtacggcatcaacaccgacaccgggctgatcgattacgacgaagtcgag
cgtctcgccgtcgaatccaagccgaaaatgattgttgccggtttctccgcttactcgaag
accctggacttcccgcgcttccgtcaaatcgctgacaaggtcggcgcgctgctgttcgtc
gacatggcccacgtcgccggtctggtcgctgctggcctgtacccgaacccgctgccgtac
gccgacgtggtcaccaccaccacgcacaaaactttgcgcggtccacgtggcgggctgatc
ctggccaagtccaacgaagaaatcgagaagaagctcaacgccgccgtgttccccggcgcc
cagggcggcccgctgatgcacgtcatcgccggtaaagccgtgtgcttcaaggaagcgctg
gagcccggcttcaaggcgtatcagcaacaagtgatcgacaacgctcaggcgatggccagc
gtgtttatcaaacgtggctacgatgtagtgtccggcggtaccgacaaccatctgttcctg
gtcagcctgatccgtcagggcctgaccggcaaagatgccgacgccgcccttggccgtgca
cacatcaccgtcaacaagaacgccgtgccgaacgatccgcagtcgccattcgtgacctcg
ggcctgcgcatcggcaccccggccgtcacaactcgcggcttcaaggtgacccagtgcgaa
gtgttggccggctggatctgcgacatcctcgacaacctcggcgatgccgatgttgaggcc
aatgttgcccagcaagtgtcggccctgtgcgcagacttcccggtttatcgctga
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