KEGG   Pseudomonas germanica: J0G10_29840
Entry
J0G10_29840       CDS       T08191                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pgf  Pseudomonas germanica
Pathway
pgf00300  Lysine biosynthesis
pgf00470  D-Amino acid metabolism
pgf01100  Metabolic pathways
pgf01110  Biosynthesis of secondary metabolites
pgf01120  Microbial metabolism in diverse environments
pgf01230  Biosynthesis of amino acids
Module
pgf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pgf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    J0G10_29840 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    J0G10_29840 (dapF)
Enzymes [BR:pgf01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     J0G10_29840 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: QYY81858
UniProt: A0ABX8YPY3
LinkDB
Position
6694884..6695714
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKGGIIELDVRNDGQIGVNM
GAPRLVPADIPFEAPAQATSYQLEVDGTTVELAAVSMGNPHAVLRVQDINSAPVHELGPK
IEHHPRFPARVNVGFLQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttactaaaatgcacggcttgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcatattcagccaaagcacgccaagcagtggggcgaccgccacacc
ggcatcggtttcgaccagttgctgatcgttgaggctccgagcaatccggacgtggatttc
cgttaccggatcttcaattccgatggctcggaagtcgagcagtgcggcaacggtgcgcgc
tgctttgcacgcttcgtgctcgacaagcgtctgaccgccaaacggcagattcgcgtcgag
accaagggcggcatcatcgaactggacgtgcgtaacgacggccagatcggcgtgaacatg
ggcgccccgcgtctggtgccagcggacattccgttcgaagcgccagcgcaagcgaccagc
tatcagctggaagtcgacggcaccacggtcgaactggccgccgtgtcgatgggcaacccg
cacgccgtgttgcgcgtgcaggacatcaacagtgcaccggtgcatgagctggggccgaaa
atcgaacaccatccgcgcttccccgcgcgagtgaatgtcggttttctccaggtcatcgac
cgtaaccgtgcgcagttgcgcgtgtgggaacgcggtgccggggaaacccaagcctgcggt
accggcgcctgtgcagcggctgtcgctgcgatcagccaggggtggatggattcgccgcta
ttgatcgacctgcccggcgggcgcctgtccattgaatgggcaggccctggccaaccggtg
ctgatgaccggtccggcagtgcgtgtatacgaaggacaagtacgtctttga

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