Pseudomonas graminis: FX982_00034
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Entry
FX982_00034 CDS
T06934
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pgg
Pseudomonas graminis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgg03009
]
FX982_00034
Enzymes [BR:
pgg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
FX982_00034
Ribosome biogenesis [BR:
pgg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FX982_00034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Motif
Other DBs
NCBI-ProteinID:
QKF49120
UniProt:
A0A6M8MD91
LinkDB
All DBs
Position
complement(29168..30127)
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AA seq
319 aa
AA seq
DB search
MTNLTPPTPGVRLVEVAPEFAGQRIDNFLITYLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDVVRVPPVRVPERDEPVPVAQGLLQRLEAAIVHEDKGLIVLNKPAGIAVHGGSG
LSFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHEQLRGDGVDKRYMA
LVRGNWPTAQKQVRAPLLKSNLRSGERMVEVNEEGKEALTLFKVLRRFGDFATMVEARPI
TGRTHQIRVHALHAGHCIAGDPKYGDEDFSREIRDLGGKRLFLHAYALTVPLPDGGELKV
EAPVDEMWAKTVERLLLAP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatctcacccccccaacccccggcgtccggctggtagaggttgcgccggaattt
gccggtcaacgcatcgataactttctgatcacgtacctcaagggcgttcccaagaccttg
atttaccgcattttgcgcaaaggcgaagtgcgcgtgaacaaaggccggatcaagcccgag
tacaagcttcaggcgggcgacgtcgtgcgcgtcccgcccgttcgcgtgcctgagcgcgac
gaacctgtgcccgttgcccagggtctgctgcagcgtctggaagccgccattgtccatgaa
gacaaaggcctgatcgtcctcaacaagcctgccggcatcgcggttcacggcggcagcggc
ttgagttttggggtcatcgaagcctttcgtcaactgcggcctgacgccaaggagctggag
ctggtccaccgtctggaccgtgacacctccgggctgttgatgatcgccaagaagcgcagc
atgttgcgtcacctgcacgagcagttgcggggcgatggcgtggataagcgctacatggcg
ctggtccgcggaaactggccgaccgcgcagaagcaggtccgtgcgccgttgctcaagagc
aatcttcgctctggcgagcgcatggtcgaagtcaatgaagagggcaaggaggcgctgacc
ctgttcaaggtcctgcgccgctttggagacttcgccaccatggtcgaagcccggcccatc
accggccgtacccatcagattcgtgtgcacgccttgcatgccggccactgcattgccggt
gacccgaagtacggtgatgaggatttcagtcgtgaaatccgagacctcggcggcaagcgc
ctgttcctgcacgcctacgccctgaccgtgccgctgccggacggtggcgagcttaaagtt
gaagcgcccgtcgacgagatgtgggccaagaccgtggagcgactgctgcttgcgccctga
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