Pseudomonas graminis: FX982_00135
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Entry
FX982_00135 CDS
T06934
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pgg
Pseudomonas graminis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgg03032
]
FX982_00135
03036 Chromosome and associated proteins [BR:
pgg03036
]
FX982_00135
03400 DNA repair and recombination proteins [BR:
pgg03400
]
FX982_00135
DNA replication proteins [BR:
pgg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FX982_00135
Chromosome and associated proteins [BR:
pgg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FX982_00135
DNA repair and recombination proteins [BR:
pgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FX982_00135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QKF49217
UniProt:
A0A1C2DAA0
LinkDB
All DBs
Position
complement(136696..136995)
Genome browser
AA seq
99 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEEHELQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaaggactgctctcatccaaa
gatgtggagttggccatcaagaccatgcttgagcagatgtcgcagtgccttgcgacgggc
gaccgtattgaaatacgcggctttggcagcttctcgctgcattaccgcgcgccccgcgta
ggccgtaatccaaagacaggtcagtctgtcagcctcgacggcaagtttgtccctcacttc
aagccaggcaaagagctccgcgaccgggtgaacgaagaagaggagcatgagctccaatag
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