Pseudomonas graminis: FX982_00308
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Entry
FX982_00308 CDS
T06934
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pgg
Pseudomonas graminis
Pathway
pgg00061
Fatty acid biosynthesis
pgg00071
Fatty acid degradation
pgg01100
Metabolic pathways
pgg01212
Fatty acid metabolism
pgg02024
Quorum sensing
pgg04146
Peroxisome
Module
pgg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FX982_00308
00071 Fatty acid degradation
FX982_00308
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FX982_00308
09145 Cellular community - prokaryotes
02024 Quorum sensing
FX982_00308
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pgg01004
]
FX982_00308
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgg04147
]
FX982_00308
Enzymes [BR:
pgg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FX982_00308
Lipid biosynthesis proteins [BR:
pgg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FX982_00308
Exosome [BR:
pgg04147
]
Exosomal proteins
Exosomal proteins of breast milk
FX982_00308
Exosomal proteins of breast cancer cells
FX982_00308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QKF49389
UniProt:
A0A6M8M378
LinkDB
All DBs
Position
complement(325216..326913)
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AA seq
565 aa
AA seq
DB search
MLENFWKDKYPTGIAADIDPDQYPNVQAVLKQSCERFANKPAFSNLGKTLTYGEMYALSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTGVKHIIVTEVADLLPPLKRLLVNSVIKYVKKMVPPFH
LPKAVKFNDVLAKGRGQRVQDVSPNGDDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCR
ALMAANLNEGTEVLITPLPLYHIYAFTFHCMAMMLSGNHNVLISNPRDLSAMVKELSKWR
FSGFVGLNTLFVALCNNADFRHLDFSSLKLTLSGGMALQTAAAERWKEVTGCSICEGYGM
TETSPVASVNPFQKIQMGTIGIPVPSTLCKTINDAGEELPLGEVGELCIKGPQVMKGYWQ
NQAATDDMLDADGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGIPDEKSGEAIKLFVVCKPGTTLSKDQVMEHMRANVTAYKVPRSVEFRDALPT
TNVGKILRRELRDEELKRLALKKPA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaaacttctggaaggataagtatccgacaggtatcgccgccgatatcgatccg
gatcagtatccgaacgtacaggccgtattgaaacagtcctgcgagcgtttcgccaacaaa
cctgcgttcagcaacctgggcaagaccctcacctacggcgaaatgtacgcgctgtccggt
gcattcgctgcgtatctgcaacagcacaccgacctgcaacccggcgaccgcatcgccgtg
cagctgcccaacgtgctgcagtacccggtcgcggtgttcggcgccattcgtgccgggctc
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatggaacaccaattcaacgac
tccggcgccaaggcgctggtctgcctggcgaacatggcgcacctggccgaaaaggtcgtg
cccaagaccggcgtcaagcacatcatcgtcaccgaagtcgccgacctgctgccgccgctc
aagcgcctgctggtcaacagcgtcatcaagtacgtgaagaagatggtcccgccgtttcac
ctgcccaaggcggtgaaattcaacgacgtgctggccaagggtcgcggtcagcgggtgcag
gatgtttcgccgaacggcgacgatgtcgcggtgctgcaatacaccggtggcaccacgggc
gtggccaaaggggcgatgctcacccaccgcaacctgatcgccaacatgctgcagtgtcgg
gcgctgatggcggccaacctcaatgaaggcaccgaggtgctgatcacgccgttgccgctg
tatcacatctatgcgttcacctttcactgcatggcgatgatgctgagtggcaaccacaac
gtgctgatcagcaacccgcgtgatctgtcggcgatggtgaaagagctgtcgaagtggagg
ttttccggttttgtcgggctcaacacgctgttcgtcgcgctgtgcaataacgccgacttc
cgccacctggatttctcttcactgaagctcaccctgtcaggcggcatggccctgcaaacc
gctgccgccgagcgctggaaagaagtgaccggctgctcgatctgcgagggttacggcatg
accgagaccagcccggtggcgtcggtgaacccgttccagaagatccagatgggcaccatc
ggcattcccgtgccctcgacgctgtgcaagaccatcaatgacgctggcgaagagctgccg
ttgggcgaagtgggcgagctgtgcatcaagggcccgcaggtgatgaagggctactggcaa
aaccaggccgccaccgacgacatgctggatgccgacggttggttgaagaccggcgacatc
gcgatcatccagccggatggctacatgcgcattgttgatcgcaagaaagacatgattctg
gtctccggcttcaacgtgtacccgaacgaactggaagacgtgctggcaaccttgccgggc
gtgctgcagtgcgcggccatcggcatcccggacgagaaatccggcgaggcgatcaaactg
ttcgtggtgtgcaaaccgggtacgaccctgagcaaggatcaggtcatggagcacatgcgc
gccaacgtcaccgcttacaaagtgccgcgcagcgtggaattccgcgacgcgctgccgacc
accaacgtcggcaagatcctgcgccgcgaactgcgcgacgaagaactgaaaagactggca
ctgaaaaagcccgcctaa
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