Pseudomonas graminis: FX982_00315
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Entry
FX982_00315 CDS
T06934
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pgg
Pseudomonas graminis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgg03021
]
FX982_00315
Transcription machinery [BR:
pgg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FX982_00315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QKF49396
UniProt:
A0A6M8MC47
LinkDB
All DBs
Position
331772..334618
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AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DTITHFENWKMTVREVDDVDGLLVYHGLNAQNQPVTLPETQLSNFIQFRLATDRLFAGQI
DPLPWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDTQLALVSLEWLVEDEKAQDALFAAGWDLLVVDEAHHLVWHEEKASREYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLHAFRAESENYRPVAEAVQELLDK
GTLSPKANGTIRGFLGAEAEALLTAVAAGDAEASARLIRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPAEYLELPIGEHADLYPEVSFQANGESTEEERWWRFDPRVDWLIDT
LKMLKRVKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPAHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHTFGPRLLPQLDGGDEDDWQALVTEARTERERLE
SELHTGRDRLLELNSGGAGEGEALVEAILEQDDQFTLPIYMETLFDAFGIDSEDHSENAL
ILRPSEKMLDASFPLGDDEGVTITYDRNQALAREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDGNGNDLSGRVSF
TTLNDQLESVPRASANKFIQAQRDVLNPQINAAESKIAPKHAERVAEAQRRLAADTEEEL
ARLTALQAVNPTVRDGELAALREQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagcgacagcgaagccgagctgggt
ttgggcaccgttctggctcaggacggccgcttgctgaccgtgctctatccggccactggc
gacacgcgccagtatgctttgcgcaatgcgccgctgacgcgcgtgcgcttctcgccgggt
gacaccatcacccacttcgaaaactggaagatgaccgtccgcgaagtcgacgacgtcgac
ggcctgctggtttaccacggcctcaacgcgcagaaccagccggtgacgctgccggaaacc
cagctgtcgaacttcattcagttccgcctggccaccgaccgcctgtttgccgggcagatc
gatcccctgccgtggttctccctgcgttatcacaccctcgaacacaccagccgccagctg
caatcctcgctgtggggcctgggcggtgtgcgcgcgcaaccgatcgcgcaccagttgcac
atcgctcgcgaagtcgctgaccgtatcgcgccgcgcgtattgctggcggacgaagtgggg
ctgggtaaaaccatcgaagccggtctggtcatccaccgccagctgctgtcgggtcgcgcc
aaccgcgtgctgatcctggtgccggaaaacctgcagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaggtcgcgctgttcgacgccgaacgcttcatcgagagcgatgcc
agcaacccgttcgaagacacgcaactggcgctggtgtcgctggaatggctggtcgaagac
gagaaggcccaggacgcactattcgcggcgggctgggacctgctggtggtcgacgaggcc
caccacctggtctggcacgaagaaaaggccagccgcgaatactcgctggtcgagcaactg
gccgaagtcattcccggcgtgctgctgctgaccgcaacgcccgagcagctcggccaggac
agccacttcgcccgtctgcgcctgctggacccgaaccgttttcacgacctgcacgccttc
cgcgccgagagcgaaaactatcgcccggtggccgaggccgttcaggaactcctggacaaa
ggcacgctgtcgcccaaggccaacgggaccatccgtggtttcctcggcgccgaagccgag
gcgctgctgaccgctgtggccgccggcgacgccgaagccagtgcccgcctgatccgcgaa
ctgcttgaccgtcacggcaccggccgcgtgctgttccgcaacacccgcgccgccgtgcaa
gggttcccggagcgcaaactgcacccttatcccctgccctgcccggccgaatacctggag
ctgccgattggcgaacacgccgacctgtacccggaagtcagcttccaggccaacggcgag
agcactgaggaagaacgctggtggcgcttcgatccgcgcgttgactggctgatcgacacc
ctgaaaatgctcaagcgcgtgaaggtgctggtcatctgcgcccacgccgaaaccgcgatg
gacctggaagacgccctgcgcgtgcgttcaggcatcccggcgacagtcttccacgaaggc
atgaacatccttgagcgcgaccgcgcggcagcctacttcgccgacgaagagttcggcgcc
caggtactgatctgctcggaaatcggcagtgaaggccgcaacttccagttctcccatcat
ctggtgctgttcgacctgcctgcgcacccggacctgctggagcagcgtattggccgtctg
gaccggatcggccagaagcacatcatcgagctgcacgtgccgtatctggaaaccagcccg
caagagcggctgttccagtggtatcacgaagcgctcaacgcattcctcaacacctgcccg
accggcaacgcgctgcaacatacgttcggtccgcgcctgttgccgcagctggatggcggt
gacgaggatgactggcaggccctggtgaccgaggcccgcactgagcgcgagcgtctggag
agtgaactgcacaccggccgcgaccgtctgctggagctgaattccggcggcgcgggcgaa
ggcgaggcgctggtggaagccatccttgagcaggacgatcagttcaccctgccgatctac
atggaaaccctgttcgacgcgttcggtatcgacagcgaggatcactcggagaacgcgctg
atcctgcggccgagcgagaagatgctcgacgccagctttccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgtaatcaggcgctggcccgcgaggacatgcagttcattacc
tgggaacacccgatggtgcagggcggcatggatctggtgctgtccggctcgatgggcaac
accgccgtggcgctgatcaaaaacaaggcgctgaagcccggcaccgtgttgctggaattg
ctctacgtcagcgaagtagtcgcgccgcgctcgctgcaactgggccgctacctgccgccg
gccgcgcttcgttgcctgctggacggcaacggcaacgacctgtcgggccgcgtgtccttc
accaccctgaacgatcagctggagagcgtgccccgggccagcgccaacaagttcattcag
gcccagcgcgacgtgctcaacccgcagatcaacgccgccgaaagcaagatcgcgccgaag
cacgctgaacgtgtggcggaagcccagcgacgtctcgcggcagacaccgaagaagagctg
gcgcgtttgaccgcgttgcaagcggtcaacccgaccgtgcgcgacggcgaactggcggcg
ttgcgcgaacaacgtgagcaaggcctggccatgctggaaaaagccgcgctgcgcctggaa
gccattcgggtgcttgtcgccggctaa
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