KEGG   Pseudomonas graminis: FX982_00424
Entry
FX982_00424       CDS       T06934                                 
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pgg  Pseudomonas graminis
Pathway
pgg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pgg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    FX982_00424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgg03019]
    FX982_00424
   03009 Ribosome biogenesis [BR:pgg03009]
    FX982_00424
   03036 Chromosome and associated proteins [BR:pgg03036]
    FX982_00424
Enzymes [BR:pgg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     FX982_00424
Messenger RNA biogenesis [BR:pgg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FX982_00424
Ribosome biogenesis [BR:pgg03009]
 Eukaryotic type
  90S particles
   RNase
    FX982_00424
 Prokaryotic type
  rRNA processing factors
   FX982_00424
Chromosome and associated proteins [BR:pgg03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     FX982_00424
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: QKF49505
UniProt: A0A6M8MLQ5
LinkDB
Position
complement(452891..453580)
AA seq 229 aa
MSVSLSRLERQLGYTFKDQELMILALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDMARDRVLAWLASEFDTLTLVDTNKDPKTRLQEFLQSRACDLPRYEVVDIQG
EPHCRIFFVECEISLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtttcattgagtcgcctggagcgtcagctcggctataccttcaaggatcaggaa
ctgatgatcctggccctgacccaccgcagctttgccggacgcaacaacgaacgtctggaa
ttcctcggtgatgccattctcaacttcgtcgccggcgaagcgcttttcgagcgtttcccc
caggcacgggaaggtcagttgtcccgcctgcgcgctcgcttggtaaaaggcgagaccctc
gcgctgctggcccgtggtttcgacctgggtgagtacctgcgcctgggctcgggtgagctg
aagagcggcggctttcgacgtgagtcgattctggccgacgcgctggaagccctgatcggc
gcgatctacctcgacgccggcatggacatggcaagggatcgcgtgctcgcctggctggcc
agcgagttcgacaccctgacgctggtcgacaccaacaaagacccgaaaacacggctgcag
gaattccttcagtcacgcgcctgtgatctgccccgctatgaagtggtggatatccagggc
gagccgcattgccgaatcttcttcgtcgaatgcgagatctctttattgaatgaaaaaagc
cggggacaaggcgttagccgtcgcattgccgaacaggtagcagcggccgcagcccttatc
gccctgggtgtggagaatggcaatgactga

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