Pseudomonas graminis: FX982_00424
Help
Entry
FX982_00424 CDS
T06934
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pgg
Pseudomonas graminis
Pathway
pgg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FX982_00424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgg03019
]
FX982_00424
03009 Ribosome biogenesis [BR:
pgg03009
]
FX982_00424
03036 Chromosome and associated proteins [BR:
pgg03036
]
FX982_00424
Enzymes [BR:
pgg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FX982_00424
Messenger RNA biogenesis [BR:
pgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FX982_00424
Ribosome biogenesis [BR:
pgg03009
]
Eukaryotic type
90S particles
RNase
FX982_00424
Prokaryotic type
rRNA processing factors
FX982_00424
Chromosome and associated proteins [BR:
pgg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FX982_00424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QKF49505
UniProt:
A0A6M8MLQ5
LinkDB
All DBs
Position
complement(452891..453580)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMILALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDMARDRVLAWLASEFDTLTLVDTNKDPKTRLQEFLQSRACDLPRYEVVDIQG
EPHCRIFFVECEISLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttcattgagtcgcctggagcgtcagctcggctataccttcaaggatcaggaa
ctgatgatcctggccctgacccaccgcagctttgccggacgcaacaacgaacgtctggaa
ttcctcggtgatgccattctcaacttcgtcgccggcgaagcgcttttcgagcgtttcccc
caggcacgggaaggtcagttgtcccgcctgcgcgctcgcttggtaaaaggcgagaccctc
gcgctgctggcccgtggtttcgacctgggtgagtacctgcgcctgggctcgggtgagctg
aagagcggcggctttcgacgtgagtcgattctggccgacgcgctggaagccctgatcggc
gcgatctacctcgacgccggcatggacatggcaagggatcgcgtgctcgcctggctggcc
agcgagttcgacaccctgacgctggtcgacaccaacaaagacccgaaaacacggctgcag
gaattccttcagtcacgcgcctgtgatctgccccgctatgaagtggtggatatccagggc
gagccgcattgccgaatcttcttcgtcgaatgcgagatctctttattgaatgaaaaaagc
cggggacaaggcgttagccgtcgcattgccgaacaggtagcagcggccgcagcccttatc
gccctgggtgtggagaatggcaatgactga
DBGET
integrated database retrieval system