Pseudomonas graminis: FX982_00786
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Entry
FX982_00786 CDS
T06934
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pgg
Pseudomonas graminis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgg03400
]
FX982_00786
Enzymes [BR:
pgg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FX982_00786
DNA repair and recombination proteins [BR:
pgg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FX982_00786
Prokaryotic type
FX982_00786
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKF49866
UniProt:
A0A6M8MDD4
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All DBs
Position
850419..851864
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AA seq
481 aa
AA seq
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MQLIWLRSDLRVHDNTALSAAMEQGPTLAVYMISPGQWQSHDDAPCKVDFWLRNLRELSK
ALAALNVPLLIVHADTWSQAPKALLGLCQQHGIDSVHVNDEYGINETKRDCDVEKALDGA
GVLFHRHLDQLFFQPGSVLTKSGGYFKVFTQFRKVCYARLHYSMPALVALPRAQQKLSGK
SDVVPDAVKGFAAPNDTLRSLWPAGEDEARDRLQSFTDEQVHYYDQERDFPAKPGTSQLS
AYLAAGVISPRQCLHSALRSNNGEFETGNSGSVTWINELLWREFYKHVLVGFPRVSRHRA
FRPETEALKWRNSPEDLEAWQQGRTGLPIVDAAMRQLLETGWMHNRLRMISAMFLTKNLL
IDWREGERFFMQHLIDGDLASNNGGWQWSSSTGTDASPYFRIFNPQSQSERFDPEGRFIK
QWVPELAELNKRDIHNPAALGGLFSAEGYPAPIVDLKASRERALQAFKSLPQRQTETQEN
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatatggctgcgcagcgatctgcgtgtgcatgacaacacggcgctgagcgct
gccatggaacagggcccgacgcttgccgtgtacatgatcagcccgggccagtggcaaagc
catgacgatgccccatgcaaagtcgatttctggctgcgcaaccttcgcgaattgagcaag
gcacttgcggcgctcaatgtccctttgctgatcgtccatgcggacacgtggtcgcaggcg
cccaaggcgttgcttgggttgtgtcagcaacacgggatcgacagcgtgcacgtcaacgac
gagtacggcatcaacgagaccaaacgcgattgtgacgttgagaaggcactcgatggcgcc
ggcgttctgtttcatcgccacctcgaccagctgttttttcagcctggcagcgtgctcacc
aagagcggcgggtatttcaaggttttcacgcaattccgcaaggtctgttacgcccgtttg
cattactcgatgccggcgctggttgcgctgcccagagcgcagcagaagttgtccggcaaa
agtgatgtcgtgccggatgcggtcaagggtttcgccgcaccgaatgataccctgcgttca
ctctggcccgccggtgaagatgaggcgcgtgatcgcctgcaaagcttcaccgacgagcaa
gtgcattactacgatcaagagcgcgacttccccgccaagcccgggaccagccagctgtct
gcgtacctggctgccggcgtgatttccccgcgccagtgcctgcattcggcactgcgcagc
aacaatggcgagttcgagaccggtaactcgggctcagtcacctggatcaacgagctgctc
tggcgtgagttttacaagcacgtgctggtgggcttcccccgtgtctcccgtcatcgcgcc
ttccgcccggaaaccgaagcgctgaaatggcgcaactcgcccgaggatctggaggcctgg
cagcagggccggaccggcctgccgattgtcgacgccgccatgcgtcagctgcttgagaca
ggctggatgcacaatcgcctgcggatgatttcggccatgttcctgaccaagaatctgctg
atcgactggcgtgaaggtgagcgtttcttcatgcagcacctgatcgacggcgatctcgcc
tcgaataacggcggctggcagtggagttcatcaaccggcaccgatgcgtcgccttacttt
cggatcttcaatccgcaaagtcagtcggagcgcttcgaccctgagggccgattcatcaaa
cagtgggtgcctgaactggctgagctgaacaagcgcgacattcataaccccgccgcgctg
ggcggcctgttcagcgctgagggttatcccgcgcccatcgttgatttgaaagccagccgc
gaacgcgccctgcaagcgttcaagtcgctgccccaacggcagacggagacgcaggagaat
gggtga
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