Pseudomonas graminis: FX982_00939
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Entry
FX982_00939 CDS
T06934
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pgg
Pseudomonas graminis
Pathway
pgg00550
Peptidoglycan biosynthesis
pgg01100
Metabolic pathways
pgg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FX982_00939
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FX982_00939
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgg01011
]
FX982_00939
Enzymes [BR:
pgg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FX982_00939
Peptidoglycan biosynthesis and degradation proteins [BR:
pgg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FX982_00939
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QKF50012
UniProt:
A0A6M8MIR8
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All DBs
Position
complement(1029838..1031736)
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AA seq
632 aa
AA seq
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MSQPIRLKDHEKDARLVRSRVVVGAVAVVVLICVLIARLYFLQVIQYEYHSTLSENNRVH
VQPIPPSRGLIYDRNGVVIADNRPSFSLSMTRERSGEWTQVLDTIVQVLELTPDDRIIFE
KRMKQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGEHFAHSVGYM
GRINEKELKSLDPVNYSGTHHMGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD
PVPGKDIVLSLDIQLQEAAEAALAGRRGAVVALDPSTGEVLAMVSQPSFDPNLFVTGISF
KAYSELRDSVDRPLFNRILRGLYPPGSTIKPAVAIAGLDTGVITASTRVFDPGYYMLPNY
DHKYRNWNRTGDGWVDLDTAIMRSNDTYFYDLAHKVGIDRLSAYLNKFGIGQKVSLDMFE
ESPGLMPSRDWKRVTRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGKWNRPHL
AKTVEGQKPVDENPMPDIVLRDPSDWGKVNHGMQQVMHGARGTARKAAIGAQYRIAGKSG
TAQVVAIRQGEKYDRSKVQERHRDHALFVGFAPADSPKIVVAVMIENGESGSGVAAPVVR
QVMDAWLLDPQGHLKPEYASNAQPPETAAREE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgattcgcctgaaagaccacgaaaaggacgcacgcctggtgcgcagccga
gtcgtggtcggtgcagtcgcggtggtcgtgctgatctgcgtgctgatcgcgcggctgtat
ttcctgcaggtcatccagtacgagtaccactcgacgctgtccgagaacaatcgcgttcac
gtgcagccgatcccgccgagtcgcggattgatctacgaccgcaacggcgtggtcatcgct
gacaaccggccaagcttcagcctgagcatgacccgcgaacgttccggcgagtggacgcaa
gtgctggacaccatcgtccaggtacttgagttgacgcctgacgaccggatcatctttgaa
aagcgcatgaagcagggccgtcggccgttcgagccggtgcccatcctgttcgagctgacc
gaagagcaaatcgcccgcatcgccgttaaccagttccgcctgccgggtgttgaagtggtg
gcgcagctggttcgccactatccccagggtgagcacttcgcgcactcggtgggttacatg
ggccggatcaacgagaaagagctgaaaagcctcgatccggtgaattacagcggcacccat
cacatgggcaaaaccggcatcgagcgtttctacgagcccgagctgcacggtcaggtcggc
tacgaagaagtcgaaaccaacgcccgcggccgcgtcttgcgcgtgctcaaacggaccgat
ccggtgcccggcaaggacatcgtcctgagcctcgacatccagctgcaggaagccgccgaa
gctgcgctggccgggcgtcgcggcgcggtggtggcgctggacccaagcaccggcgaggtg
ctggcgatggtcagccaaccgagcttcgatccgaacctgtttgtcaccggcatcagcttc
aaggcctactccgagctgcgcgattcggtggaccgcccgctgttcaaccgcatcctgcgg
ggcttgtatccaccgggttcgaccatcaagcccgccgtggcgattgccggtctcgacact
ggcgtgattacggcgagtactcgggtgttcgaccccggctattacatgctgccgaactac
gatcacaagtaccgtaactggaaccgcaccggcgacggctgggtggatctggacaccgcc
atcatgcgctccaacgacacctacttttacgatctggcccacaaggtcgggatcgatcgg
ctgtcggcgtacttgaacaagttcggcatcggccagaaagtctcgctggacatgttcgaa
gaatctcccggtctgatgccgtcccgtgactggaagcgcgtcacccggcggcaggcgtgg
ttcccgggcgaaacactgattctggggatcggtcagggctacatgcaggccaccccgctg
cagttggcccaggctacggcgctggtggcgaacaaaggcaaatggaaccgtccgcacctg
gccaagaccgtcgaagggcagaagccggtggacgaaaacccgatgccggacattgtcctg
cgcgacccctctgactggggcaaggtcaaccacggcatgcagcaagtcatgcacggcgcc
cgcggcaccgcgcgcaaggccgcgattggtgcgcagtaccgcatcgccggcaagagcggt
acagcccaggtcgtcgccattcggcagggcgagaaatacgaccgctcgaaagtccaggag
cgccaccgcgaccacgccttgttcgtgggctttgcgccggccgacagcccgaagatcgtc
gttgcggtgatgattgaaaacggcgagtccgggtcgggtgttgccgcgccggtggtgcga
caggtcatggacgcctggctgctcgatccccagggccatctgaaacccgaatacgccagc
aatgcacagcctccggagaccgcggcccgtgaagagtaa
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