Pseudomonas graminis: FX982_01008 Help Entry FX982_01008       CDS       T06934                                  Name (GenBank) ATP-dependent DNA helicase RecQ   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pgg  Pseudomonas graminis Brite KEGG Orthology (KO) [BR:pgg00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pgg03400]     FX982_01008 Enzymes [BR:pgg01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      FX982_01008     5.6.2.6  RNA 3'-5' helicase      FX982_01008 DNA repair and recombination proteins [BR:pgg03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     FX982_01008 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WH_Lhr WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 AlkZ-like PhoH MarR HTH_5 DUF5805 GntR HTH_69 HTH_IclR KfrA_N Motif Other DBs NCBI-ProteinID:  QKF50081 UniProt:  A0A6M8MK20 LinkDB All DBs Position 1100510..1104823 Genome browser AA seq 1437 aa AA seqDB search MNLLQTPDPVLDAFHPAVSAWFRSTFPAITAAQAQAWPLIKRRESTLIAAPTGSGKTLTA FLAVIDDLVHQGLERGGELPDETFVVYVSPLKALSNDIQINLQNPLAGITDQLIQQGLPG LRITTAVRTGDTPQKERTAMRKTAPNILVTTPESLYVLLGSDSGRRMLSSTQTVIVDEIH AIAAGKRGSHLALTLERLQALCAKPLLRIGLSATQKPIERVSRFLVGSDPVSRSCAIVDI GHARPRDLAIEVPPVALSAVMSSDVWQLVYDRLAVLARGHRTTLIFVNTRRLAERMARHL SERLGKEAVAAHHGSMAKEQRLEAEQRLKRGELQVLIATASLELGIDIGDVDLVCQISSP RSIASFLQRVGRSGHHVGGTPKGRLFAVSRDDLIECAALLDCVRRGELDTLVIPKAPLDV LAQQIIAEVSCQEWQEQDLLALFRKASPYADVDEGHYQALLSMLAEGYSGRQGVRAAYLH RDAVTRTLRGRRGSKLTAVTSGGTIPDNADYSVVLEPQALNIGTVNEDFAVESAAGDIFQ LGNTSYRILRVESGRVRVEDAHGMPPNIPFWMGEAPGRSDELSFAVARLQADIDEQLSAH PGNLLACTDWLMKSLGLDLASAEQIIEYLARAHSALGALPSQDTLVIERFFDQSGGTQLV IHSPFGSRVNRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTAHSFALDEVWRYLNSA TAEHLLIQAVLDAPLFGVRWRWNAGVALALPRYTGGRKVAPQLQRIKSDDLIATVFPDQI ACLENLVGEREVPEHPLIEQTLDDCLHEAMDAESWLKLLRRMENGEVRLVSRDLPAPSPL AAEILNAKPYAFLDNAPLEERRTQAVLNRRWSDPESTDDLGALDVDAIKAVADEAWPQPQ NVDEMHEALMSLGCITGVEAREHGDWMKWLESLARSGRGTRLQVTPEQALWIPLERLTCL QALYPAAEMHPPLAALAGFDEAWNEDEARVEIVRARLSGFGPLTVPAIAEPLALTQNEVA QALAQLENEGYVLRGQFNPDAREEEWCERHLLSRIHRYTVKRLRREIEPVSLQDFTRFLF DWQHLSATTRSQGKAALPEVVAQLEGFSSAAGAWDSDLLPARLKDYSSIWLDDLCRSGKV VWMRLTSRSKVGSAALRSTPIVLLPRPQVRLWTGLTEQPAPTELSLRAQKVHEVLSSQGA MFFDELTGEAHLLRAELETALQELVGAGLVNADSFAGLRALITPASKRTSHTSRRNRGAF IGGMDDAGRWALLRRAPAKEEGASQRIDSDTLEHVAMTLLRRYGVVFWRLLEREADWLPT WRELLRTFHRLEARGEIRGGRFVAGLAGEQFALPEAIPLLREVRKRPLDGSLIAVSGVDP LNLAGTLLPGAKVPAIVGNKLVYRDGIPIAAIIAGKPQYWGEVDEALMLQVRDRLFR NT seq 4314 nt NT seq  +upstreamnt  +downstreamnt atgaaccttctccagacacccgacccggtgctcgacgcctttcatccggcggtcagcgcg tggtttcgctccacgttcccggccattaccgcggcccaggcccaggcgtggccgctgatc aaacgccgcgagtccacgttgatcgccgcgcccaccggctccggtaaaaccctgaccgcc tttctggcggtcatcgatgatctggtgcatcaagggctggagagaggcggcgagctgccc gatgagacgtttgtcgtttacgtttcgcccttgaaagcgctgtccaacgacatccagatc aatctgcaaaacccgctggcgggcatcaccgatcaattgattcagcaagggctgcccggg ctgcgaatcaccaccgctgtgcgcaccggcgacacgccgcagaaagaacgcacggcgatg cgtaaaactgcgccgaacattttggtgacgacgccggaatcgctgtacgtgctgctgggc tcggattccgggcggcgcatgttgtcgagcacgcagacggtcatcgtcgacgaaattcac gccatcgccgccggcaagcgtggcagtcatctcgccctgacgctggagcgtttacaggcg ctgtgcgcaaaaccgctgctgcgcatcgggctgtcggcgacgcagaaacccatcgagcga gtctcgcgctttctggtcggcagcgatccggtcagccgatcgtgcgccatcgtcgacatc ggccacgcgcgccctcgggatctggctatcgaagtgccgccggtggccctgagcgccgtg atgtccagtgacgtctggcaactggtctacgaccggctcgctgtgctggcgcgtggacat cgcaccacactgatttttgtcaacacccggcggctggccgagcgcatggcgcggcatctg agcgagcggctgggcaaagaggcggtcgccgcgcatcacgggagcatggccaaggaacag cggctcgaagccgagcagcgcctgaaacgcggtgagctccaagtcctgatcgccaccgct tcgctggaattggggattgatatcggcgacgtcgatctggtctgccagatcagctcgccc cgctccatcgcgtcctttttgcagcgcgtcggccgttccggtcaccacgtaggcggcacg cccaagggacggctgtttgctgtgtctcgggatgatctgatcgagtgcgcggcgctgctg gattgcgtgcggcgcggcgagctcgacacgctggtcattcccaaagcaccgctggacgtc ctggcgcagcagatcatcgccgaagtcagttgtcaggaatggcaggagcaggacctgctg gcgctgttccgcaaggcttcgccctacgccgacgttgacgaaggccattatcaggcgctg ttgagcatgctcgccgagggttacagcgggcgtcagggcgtgcgcgcggcgtacctgcat cgcgacgcggtaacccgcacgttgcgtggtcggcgcggcagcaaactcaccgcggtcacc agcggcggcacgattccggacaatgccgattacagcgtggtcctcgaaccccaggcgctc aacatcggcaccgtcaacgaagacttcgccgtggaaagcgcggcgggtgacatcttccag ctgggcaatacctcttaccggattctgcgggtcgagtccggccgcgtgcgggtcgaggac gcccacggcatgccgccgaacatcccgttctggatgggcgaggccccagggcgcagcgat gaattgtcttttgccgtcgcacgtttgcaggccgacatcgatgagcagctcagcgcccat cccggcaaccttctggcctgcaccgactggctgatgaaaagcctgggcctggacctcgcc agcgccgagcagatcattgaatacctcgctcgcgcgcactcggccctgggtgcgctgccg tcacaggacacgctggtcattgagcgctttttcgatcaatccggcggcacgcagctggtc attcattccccgttcggcagccgggtcaatcgcgcgtggggcctggcgctgcgcaagcgc ttctgccgcaccttcaacttcgagctgcaagccgccgccagcgaggacgcgatcgtgctg tcgctgtccacggcgcacagttttgcgctcgatgaagtctggcgttatctcaactccgcc actgccgagcatttactgattcaggcagtgctggatgcgccgctgttcggcgtgcgctgg cgctggaacgccggtgtcgcactggccctgccgcgttacaccggcgggcgaaaagtggcg ccgcagctgcagcggatcaagagcgacgatttgattgccacggtgtttccggaccagatc gcctgcctggaaaatctggtgggcgagcgggaagtgccggagcatccgctgatcgagcag accttggacgattgcctgcacgaagccatggacgccgagagctggctgaaactgctgcgg cgcatggagaacggcgaggtgcgtctggtcagtcgcgatttgcccgcgccctcgccgctg gcggcggaaatcctcaacgccaagccgtatgcgtttctcgacaacgcgccgctggaagaa cgtcgcacccaggcggtgctcaatcggcgctggagcgacccggaatccaccgacgatctc ggcgcgctggatgtcgatgcgatcaaagcggtggccgatgaagcctggccgcagccgcaa aacgtggatgagatgcacgaggcgctcatgagcctgggctgcatcaccggcgtggaggcc cgcgagcacggcgactggatgaaatggctggaaagcctggcccgctcgggtcgtggcacg cgcttgcaggtcaccccggaacaggcgttgtggattccgctggagcggctgacctgtttg caggcgctctaccccgctgcggaaatgcacccgccgttggcggcactggccgggttcgac gaagcgtggaacgaggacgaagcgcgggttgaaatcgtgcgtgcgcggctgagcggtttc ggcccgctcaccgtcccggccattgccgagccgttggcgctgacacagaacgaggtcgct caggcgctggcgcagctggagaacgaaggttacgtgttgcgcggccagttcaaccctgac gcccgcgaggaagaatggtgcgagcggcatctgctgtcgcgcatccaccgttacacggtc aagcgcctgcgccgggaaatcgagcctgtgtcgctgcaagacttcactcgattcctgttc gactggcagcatctatctgccacgacccgaagccagggcaaagccgcgctgccggaagtc gtcgcgcagctggagggtttctcgtcggcggcaggcgcgtgggacagtgatctgctgccg gcacgcttgaaggattattcatcgatttggctggatgacctgtgtcggtccggcaaagtg gtgtggatgcgtctgaccagtcgcagcaaggttggcagcgccgcgttgcgcagtacgccg attgtgctgctgccccgacctcaggttcgcctgtggaccgggctgaccgagcagccggcg ccgaccgaattatccctgcgcgcgcagaaggttcatgaggtgttgtcgagccagggtgca atgtttttcgacgagctgaccggcgaggcgcacttgctgcgggccgagctggaaacggcg ctgcaggagctggtgggcgccgggctggttaatgccgacagtttcgccgggctgcgggcg ctgattaccccggcgagcaagcgcaccagccacaccagccgacgcaatcgcggtgcgttt attggcggcatggacgacgccggacgctgggcattgttgcgtcgcgcgccggcgaaggaa gaaggcgcgtcgcaaaggatcgacagcgacacgctggagcatgtcgcaatgacgttgctg cgccgatacggtgtggtgttctggcgcctgctggagcgcgaggcggattggctgccaacc tggcgcgagttgctgcgcacgttccatcggcttgaggcgcgcggagagatccgcggcggg cgcttcgtggcaggcctggcgggtgaacagttcgcgttgcccgaagccatcccgttgctg cgcgaagtccgcaaacgtccgctggacggcagcttgattgccgtcagcggggtcgacccg ctcaatctcgccgggacgctgctgcccggcgcgaaagtcccggcgattgtgggcaataag ctggtttaccgcgacggcatccccatcgccgccattatcgccggcaagccgcagtactgg ggcgaggtggatgaggcgctgatgttgcaggtgcgcgatcggctgttcagataa

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