Pseudomonas graminis: FX982_01162
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Entry
FX982_01162 CDS
T06934
Name
(GenBank) putative RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgg
Pseudomonas graminis
Pathway
pgg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FX982_01162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgg03021
]
FX982_01162
Transcription machinery [BR:
pgg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FX982_01162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_24
Sigma70_ECF
MerR
Motif
Other DBs
NCBI-ProteinID:
QKF50225
UniProt:
A0A6M8MNZ0
LinkDB
All DBs
Position
1259596..1260114
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AA seq
172 aa
AA seq
DB search
MSSLQSPQQQLVGTLYRDHRGWLLGWLRRNVACPHRAEDLSQDTFIRLLGREQLLEPREP
RAFLVSIAKGLLFDHFRRAALEQAYLDELMLIPEAEQPSLEEQQLILDDLKAIDRLLGKL
SSKARAAFLYNRLDGMPHAEIATKLGVSVPRVRQYLAQGLRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcacttcaaagtccccagcagcagctcgtcggaacgctttatcgcgaccaccgc
ggctggctgctgggttggctccgacgcaacgtggcttgcccccatcgcgccgaagacttg
agccaggacacgttcattcgcctgctgggccgcgagcaattgcttgaaccccgcgagccc
cgggcctttctggtctcgatcgcgaaaggcttgttgttcgaccactttcgccgggccgcg
ctggagcaggcgtatctggacgagctgatgctgattccagaggcggagcagccttcgctg
gaagagcagcaactgattctcgatgacctcaaagccattgatcgcctgctgggcaagctc
tccagcaaagcgcgcgccgcctttttgtacaaccgcctggacgggatgccccacgcggag
atcgccacaaagctcggcgtttccgtaccccgcgtgcgtcagtatctggcgcagggtttg
cgccagtgctacatcgcgctgtatggcgagccaacatga
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